Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00143 ATGGAGTCAGCGACCAAAAATCAAGTCTTCTTCTGCTTCTTTCTATGTCTTCTCTTAGTCTCAGCCTCTTCATTATCTGCTTCAAAATCAACCCATACATTCCCCAAAAAAGCCCTCCCAACAAAGCATGGTCACCTTCCAATCAGCCCCACTTCAACTTCTTCCATTTTCTATGCTTTCTATGAAGCACAGAACTCCACTTTACCACTCTCCCGTACCCCACTTCTCATATGGCTCCAAGGTGGCCCTGGTTGCTCCTCCATGATTGGAAACTTTTACGAACTTGGACCATGGCGTGTCACCGAATCACTCACCCTTCAACGCAACCATGGTGCTTGGAATAGAATTTTTAGCCTTCTTTTCCTTGATAGTCCCATTGGAACTGGCTTTAGTGTGGCCTCAACGAGACAAGAAATTCCAACTGATCAAAACCATGTTGCAAAGCATCTTTTTGCTGCTATAACCAGGTTTGTTCAACTTGACCCTCTTTTTAAGCATCGCCCTATTTATATTACTGGTGAAAGCTATGGTGGGAAGTATGTGCCTGCAATAGGGTATCACATACTGAAGAAAAATGCACAGTTGCATGTTTCTCAAAGAGTGAATTTGGCTGGTGTGGCTATTGGGGATGGTTTAACTGACCCCGAAACTCAAGTGGTTACTCATGCTTTGAATGCTTATTATGTTGGATTGATCAATGAGAAGCAAAAGAATGAGCTGGAGAAAGCTCAATTGGAAGCAGTTAGATTGGCCCAGATGGGGAATTGGAGTGAAGCAACAGATGCCAGAAACAATGTCATGAATATGTTGCGAAACATGACAGGGTTGGCTACTTTGTATGACTATACAAAGAAAGCTCGTTATCAGGATTATTTGGTTGAGAAATTCTTGAACATTGCAAAGGTGAAGAAAGCTTTGGGGGTGAATGAATCGTTTGTGTATGAGTTATGCAGTGATGTTGTGGAGGCTGCATTACATGCTGATGTGATGAAAAGTGTGAAATATATGGTGGAATACTTGGTGAGGAGGAGCAAAGTGCTGTTATATCAAGGTCAGAATGATTTGAGGGCTGGTGTGGTCCAATCAGAGGTTTGGGTGAAGACAATGAAATGGGAAGGGATTGTGGAGTTTGTGAATGCTGAAAGGAAGATATGGAAGGTTAATGGAGAGCTTGCCGGGTATGTTCAAAACTGGAAGTCTCTAACCAATGTTGTTGTTTTGGGTGCTGGGCATATTTTGCCTGCTGATCAGTGCTTTTGTGTGGTGGTGGTATTGGATGGCGATGGTGGTGGTGGTGCCAATGGCGGCAGCAATAGTAGAGATGGCAGCAACAATTTTGATGGTTGTGGAGGTGGCAATTTCGGTGGTTGTGGTGTCGATGATGGTGATGACAACAATGACATTAGGAAAGGTTATTGTTAA 1422 0.4318 MESATKNQVFFCFFLCLLLVSASSLSASKSTHTFPKKALPTKHGHLPISPTSTSSIFYAFYEAQNSTLPLSRTPLLIWLQGGPGCSSMIGNFYELGPWRVTESLTLQRNHGAWNRIFSLLFLDSPIGTGFSVASTRQEIPTDQNHVAKHLFAAITRFVQLDPLFKHRPIYITGESYGGKYVPAIGYHILKKNAQLHVSQRVNLAGVAIGDGLTDPETQVVTHALNAYYVGLINEKQKNELEKAQLEAVRLAQMGNWSEATDARNNVMNMLRNMTGLATLYDYTKKARYQDYLVEKFLNIAKVKKALGVNESFVYELCSDVVEAALHADVMKSVKYMVEYLVRRSKVLLYQGQNDLRAGVVQSEVWVKTMKWEGIVEFVNAERKIWKVNGELAGYVQNWKSLTNVVVLGAGHILPADQCFCVVVVLDGDGGGGANGGSNSRDGSNNFDGCGGGNFGGCGVDDGDDNNDIRKGYC 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00143 473 ProSitePatterns Serine carboxypeptidases, serine active site. 171 178 IPR018202 GO:0004185
Gma20g00143 473 Gene3D alpha/beta hydrolase 20 420 IPR029058 -
Gma20g00143 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 421 IPR001563 GO:0004185|GO:0006508
Gma20g00143 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Gma20g00143 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 401 414 IPR001563 GO:0004185|GO:0006508
Gma20g00143 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 182 IPR001563 GO:0004185|GO:0006508
Gma20g00143 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
Gma20g00143 473 PANTHER CARBOXYPEPTIDASE 21 421 - -
Gma20g00143 473 Coils Coil 233 253 - -
Gma20g00143 473 SUPERFAMILY alpha/beta-Hydrolases 41 420 IPR029058 -
Gma20g00143 473 Pfam Serine carboxypeptidase 40 417 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00143 Gma-Chr20 1460806 1463448 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00143 292 411 Calmodulin-binding Proteins AT2G22960 19.008 6.02e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00143 K09645 - gmx:100781899 807.364