Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00138 ATGGCATCCATCATCTCTTTCACCCTTAAGACCCTTCTATTCCTCTGCTTCTGTTCCTTTCACTTCCCACTCTCAACTTCATCAGAATCAAATCCTTCATTCCCCAAAGAAGCCCTCCCCAACAAACATGGTTACCTTCCAATAAGCCCCACTTCAACTTCTTCCATTTTCTACGCTTTCTATGAAGCCCAGAACTCAACTTTACCACTCTCACAAACCCCACTTCTCATATGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGATTGGAAACTTGTACGAACTTGGACCGTGGCGCGTCACGGAATCACTCACCCTTCAACCCAACCCTGGTGCTTGGAATAGAATCTTTGGCCTTCTTTTTCTTGATAGTCCCATTGGAACTGGCTTCAGTGTGGCCTCAACGAGACAAGAAATTCCAACTGATCAAAACGGCGTTGCAAAACACCTTTTTGCTGCTATAACAAGCTTTCTTCAGCTTGATCCTGTTTTCAAGAATCGCCCTATTTATATTACTGGTGAAAGCTATGCTGGGAAGTATGTGCCTGCTATTGGGTATTACATATTGGAGAAAAATGCAAACTTGAAGGTTTCTGAAAGAGTGAATTTGGCTGGTGTGACTATTGGGGATGGCTTAACTGACCCTAAAACTCAAGTGGCTACTCATGCTCTGAATGCTTATTATGTTGGATTGATCAATGAGAGGCAAAAGCATGAGTTGGAGAACGCTCAATTGGAAGCGGTTCGGTTGACTCAAATGAGGAATTGGAGTGAAGCAACTGATGCAAGAAACAAAGTCTTGAGAATGTTGCAAAACATGACAGGGTTGGCTACTTTGTATGACTATACAAGGAAGGCTCCTTATGAGGATGATTTGGTTGAAAAATTCTTGAACATTGCTGAGGTGAAGAAGGCCTTGGGGGTGAATGAATCGTTTGTGTATGAGATATGCAGCGATGTTGTTGGGGCTGCATTGCATGCTGATGTGATGAAGAGTGTGAAATATATGGTGGATTACTTGGTGAGAAGGAGCAAGGTGTTGTTATATCAAGGGCAACATGATTTGAGGGATGGTGTGGTTCAAACAGAGGTTTGGGTGAAGACAATGAAGTGGGAAGGGATTGTGGAGTTTGTGAATGCTGAAAGGAAGATATGGACAGTTAATGGAGAGCTTGCAGGGTATGTTCAAAATTGGAAGTCTCTCACCAATGTTGTGGTTTTGGGTGCTGGGCATCTTTTGCCTACTGATCAACCTCTTAATTCTCAAGCAATGATAGAAGATTGGGTTTTGGAAAGGGGAGTGTTTGAAAATGCGCATAAGAGACATGTATCAAGTGAGTCTGTATTTGTTTTGTAA 1356 0.4314 MASIISFTLKTLLFLCFCSFHFPLSTSSESNPSFPKEALPNKHGYLPISPTSTSSIFYAFYEAQNSTLPLSQTPLLIWLQGGPGCSSMIGNLYELGPWRVTESLTLQPNPGAWNRIFGLLFLDSPIGTGFSVASTRQEIPTDQNGVAKHLFAAITSFLQLDPVFKNRPIYITGESYAGKYVPAIGYYILEKNANLKVSERVNLAGVTIGDGLTDPKTQVATHALNAYYVGLINERQKHELENAQLEAVRLTQMRNWSEATDARNKVLRMLQNMTGLATLYDYTRKAPYEDDLVEKFLNIAEVKKALGVNESFVYEICSDVVGAALHADVMKSVKYMVDYLVRRSKVLLYQGQHDLRDGVVQTEVWVKTMKWEGIVEFVNAERKIWTVNGELAGYVQNWKSLTNVVVLGAGHLLPTDQPLNSQAMIEDWVLERGVFENAHKRHVSSESVFVL 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00138 451 Coils Coil 228 253 - -
Gma20g00138 451 Gene3D alpha/beta hydrolase 25 444 IPR029058 -
Gma20g00138 451 PANTHER CARBOXYPEPTIDASE 22 437 - -
Gma20g00138 451 ProSitePatterns Serine carboxypeptidases, serine active site. 171 178 IPR018202 GO:0004185
Gma20g00138 451 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
Gma20g00138 451 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Gma20g00138 451 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 182 IPR001563 GO:0004185|GO:0006508
Gma20g00138 451 PRINTS Carboxypeptidase C serine protease (S10) family signature 401 414 IPR001563 GO:0004185|GO:0006508
Gma20g00138 451 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 22 437 IPR001563 GO:0004185|GO:0006508
Gma20g00138 451 Pfam Serine carboxypeptidase 39 429 IPR001563 GO:0004185|GO:0006508
Gma20g00138 451 SUPERFAMILY alpha/beta-Hydrolases 42 429 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00138 Gma-Chr20 1431126 1432659 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00138 292 429 Calmodulin-binding Proteins AT2G22960 20.863 2.62e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00138 K09645 - gmx:100780822 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02114 07 42977909 42979373 Gma20g00138 20 1431126 1432659 GST