Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00131 ATGGCGGTTTTACCAAGTAGCTCCTCAAACTTGGAATTGACCATATCTGTCCCTGGCTTTGCTTCTTCACCAGTCCTTCTTCCCTTATCATCTGTGAAAGAATTGGACATAAACCAAGTACCTCTAGAAGAAGATTGGATGGCATCAAACATGGAAGATGAAGAAGAAGGCAGCAATGGAGACCCTCCTCGCAAGAAACTCCGTCTCACAAAGGAACAATCTCGTCTCCTTGAAGAAAGCTTTAGACAAAACCACACTTTGAACCCAAAGCAGAAAGAGTCTTTGGCAATGCAACTGAAGCTGCGACCGAGGCAAGTGGAGGTGTGGTTTCAGAATCGTAGGGCCAGGAGCAAGCTGAAGCAGACGGAGATGGAGTGCGAGTACCTGAAGAGGTGGTTTGGTTCCCTCACAGAGCAGAACCGGAGGCTGCAGAGGGAAGTGGAAGAGCTACGAGCCATGAAGGTGGGCCCACCCACCGTGATCTCCCCTCACTCCTGCGAGCCGCTCCCTGCCTCCACACTTTCCATGTGTCCCCGCTGCGAGCGTGTCACCTCCACCGCCGACAAACCGCCCTCCGCCGCCGCCGCCGCCGCCACTTTGTCCCCTAAAGTGCCGCCAACGCAATCCCGTCAACCCTCCGCTGCCTGTTGA 651 0.5422 MAVLPSSSSNLELTISVPGFASSPVLLPLSSVKELDINQVPLEEDWMASNMEDEEEGSNGDPPRKKLRLTKEQSRLLEESFRQNHTLNPKQKESLAMQLKLRPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTSTADKPPSAAAAAATLSPKVPPTQSRQPSAAC 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00131 216 CDD homeodomain 63 121 IPR001356 GO:0003677
Gma20g00131 216 Gene3D - 56 125 - -
Gma20g00131 216 MobiDBLite consensus disorder prediction 202 216 - -
Gma20g00131 216 Pfam Homeodomain 64 118 IPR001356 GO:0003677
Gma20g00131 216 ProSiteProfiles 'Homeobox' domain profile. 60 120 IPR001356 GO:0003677
Gma20g00131 216 SUPERFAMILY Homeodomain-like 50 121 IPR009057 -
Gma20g00131 216 SMART HOX_1 62 124 IPR001356 GO:0003677
Gma20g00131 216 Pfam Homeobox associated leucine zipper 120 154 IPR003106 GO:0006355|GO:0043565
Gma20g00131 216 PANTHER - 1 202 - -
Gma20g00131 216 MobiDBLite consensus disorder prediction 184 216 - -
Gma20g00131 216 SMART halz 120 163 IPR003106 GO:0006355|GO:0043565
Gma20g00131 216 ProSitePatterns 'Homeobox' domain signature. 95 118 IPR017970 GO:0000981|GO:0006355
Gma20g00131 216 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-17 1 202 - -
Gma20g00131 216 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00131 Gma-Chr20 1372148 1376599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00131 32 200 Homeobox Transcription Factor Family AT1G70920 61.494 5.57e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma20g00131 Homeodomain 3.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00131 K09338 - gmx:100778684 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02108 07 42917253 42922543 Gma20g00131 20 1372148 1376599 GST