Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00117 ATGGTTCTGATGCAACCTAGAATTCAGTGTGAAGCAAATAAAAGGCAAATCATGTCATTAGTTAGGTCTGCTGATCTAGCTCCTACATCATATGAAAATGATAAGCTATTCTCACTAAAGGGAATAGATGTTAGACCAGGCCTATCCTCCCAAGTTTTTGGCCCTGATAATAATAGAAGCTTGTACATGACAGATATTTACTTCGGTGAGAGTTATGAGAAGTATTTCCATGACTCACAAACAAAAGAACAGATAGAACCATCTAATTCCAACATCTTTGGAAGTTCAAATCACCCTGATGTAGCCTTTTCTTACCAACTCATAGCCAATTCAGAAACTTCTATGGTTGCCAATAACCCATTTCATTCTTCTTTTATGTCTACAAGGCATCATGATGCTTATTAG 405 0.3679 MVLMQPRIQCEANKRQIMSLVRSADLAPTSYENDKLFSLKGIDVRPGLSSQVFGPDNNRSLYMTDIYFGESYEKYFHDSQTKEQIEPSNSNIFGSSNHPDVAFSYQLIANSETSMVANNPFHSSFMSTRHHDAY 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00117 134 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 28 96 IPR005202 -
Gma20g00117 134 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 28 96 IPR030011 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00117 Gma-Chr20 1181786 1182190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00117 14 106 GRAS Transcription Factor Family AT1G21450 43.750 2.82e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00117 - - gmx:100798897 187.963