Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00114 ATGGCAAGAAAAACCAAGTCCATTTTCTTCACCTTCTTATTATGCTCTTGGGTGGTGGTAGTAGTAGCCCAAGAGGTAGCAATTGCAAAATCCGAAAGTGAAGCATTAGGGGAACCGGAATTAGAAAAAAGAGAAACACTTGAAATCATCATTGGTGGTGGTGGTGGTGGTGGTTACCCTGCTCCTTCTCCTTCTCCATCTTCCCCTGCATATTGCCCACCTCCTCCACCAAAACCACTGAGCCGGTTAGAAAAAGCGCGTCGAGTGCTTCTCAAGTTCAAAACCCTAATCTATGATCCAGACTGTTACACGCAAAGCTGGAACGAGAACACCGACACGTGTGATTTCAACGGGGTACGATGCGCCACATATCCAAACTCAGAAGAGAAAGCAGTGGCTGGACTTGACCTAAACGGAGCAAAACTCAGCACTAAAGACGGTTGCAATTTGCCCCTCACGGGTCTCGTCGACAGCATACCCGAGTTAACATTCTTCCACGTTAACTCCAACAACTTCTCCTTCACCGGTGGCTTCCCCAACAACATCACGACCTTCCCTTTCTTCTTCGAGCTTGACCTAAGTAACAACAAAGTCAGTGGCCAGTTCCCCACGCAAGCGATTCAGAACAACCAGTTAGTCTTCCTGGACCTCAGGTTCAACCAGCTTACCGGGCCGATAGACCCGAAACTCTTCCAGAGGGACCTCGATGTGATCTTTGTCAACGATAACCAGTTCACCGGGTGCCTCCCGGAGAATTTCGGGTCCACGCCGGCCCGGTACCTTACATTTGCCAACAACAGACTCTCCGGGTCACTCCCGAAGAGTCTCGGCTACGCGCCGAGTCTCACCGAGGTGCTCTTCTTGGGGAACCATTTCGAAGGGTGTCTGCCCTTCGAAATAGGTTACCTCAAGAAGGTCGTCGTGTTTGACGTAAGCAAAAATCTCTTGACCGGCCCTATCCCGCTCTCCTTCGGATGCTTGAAGAGCATTCAGTTTCTTAATTTGGCGCAAAACAAGCTCTACGGTTGTGTTCCGGACAACCTTTGTCAAATTCCTTCTATCCGGAACAATGGGAATCTCTCTTTGGCGGATAATTATTTCAAGGAAATTGGACCTTCGTGTTGGAGTTTGATCAAGTCCAAGGTTTTGGATGTGTCAAGAAACTGCATTCCGGGGCTTCCAGACCAAAAATCACCCAAAGAATGCTACCAGTTTTACAAAACAAAGAAGACATGCCCTAACCAGAATTCATTTTACTACGTCCCGTGTAAATCCCACTGGGGGACACAGAGCAACAAGCCCCCTGCTCCACCTTCTGAGCCTGTGACTTACAACGCTCTCAAACCACATCGCTTGAGATTGTGA 1365 0.4886 MARKTKSIFFTFLLCSWVVVVVAQEVAIAKSESEALGEPELEKRETLEIIIGGGGGGGYPAPSPSPSSPAYCPPPPPKPLSRLEKARRVLLKFKTLIYDPDCYTQSWNENTDTCDFNGVRCATYPNSEEKAVAGLDLNGAKLSTKDGCNLPLTGLVDSIPELTFFHVNSNNFSFTGGFPNNITTFPFFFELDLSNNKVSGQFPTQAIQNNQLVFLDLRFNQLTGPIDPKLFQRDLDVIFVNDNQFTGCLPENFGSTPARYLTFANNRLSGSLPKSLGYAPSLTEVLFLGNHFEGCLPFEIGYLKKVVVFDVSKNLLTGPIPLSFGCLKSIQFLNLAQNKLYGCVPDNLCQIPSIRNNGNLSLADNYFKEIGPSCWSLIKSKVLDVSRNCIPGLPDQKSPKECYQFYKTKKTCPNQNSFYYVPCKSHWGTQSNKPPAPPSEPVTYNALKPHRLRL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00114 454 Pfam Leucine rich repeat N-terminal domain 86 121 IPR013210 -
Gma20g00114 454 MobiDBLite consensus disorder prediction 62 77 - -
Gma20g00114 454 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 27 437 - -
Gma20g00114 454 SUPERFAMILY L domain-like 85 390 - -
Gma20g00114 454 PANTHER BNAC05G26270D PROTEIN 27 437 - -
Gma20g00114 454 Gene3D Ribonuclease Inhibitor 257 426 IPR032675 -
Gma20g00114 454 Gene3D Ribonuclease Inhibitor 83 256 IPR032675 -
Gma20g00114 454 MobiDBLite consensus disorder prediction 58 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00114 Gma-Chr20 1125705 1127393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00114 82 405 Leucine-rich Repeat extension Gene Families AT4G13340 40.798 1.65e-69 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00114 - - gmx:100796207 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02089 07 42648962 42651006 Gma20g00114 20 1125705 1127393 GST