Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00112 ATGATGACTCCAAACTTGAATCTGGAACCAGAAGATGATTTTAAAGTCCTCATCCAAGTAGGTTCTGATAAGTCGATACGAGAGACATCACATGATCTTACCAAGGCCGATCCTGACCCAGGTCCTGTTTCCCTGGACTTGTCCCTCAACTTCAATCCCGGTGATGAAGAGTTGAAAGTTACAAGTGACACTAACTGTGAAGTAGGACCTGAAACTCATGCCTCAGCATCAGCAATTCCTAGAGTTTTCTCTTGTAATTATTGCTGGCGGAAATTCTTTAGCTCACAGGCATTAGGTGGACACCAGAATGCTCACAAAAGGGAGAGGACAATGGCGAAGCACGCAATGCGAATGGGGATGTTCGCTGAAAGGTACACAAGCCTAGCATCTCTGCCTCTTCATGGTTCCTCTTTTCAGTCGCTCGGACTTGAAGCTCATGCTGCAATGCACCAAGGACATGTGCATCATCATTCAATGAGGGCTCCTGATATAAGAGCTGCAGCAAAATTCGGTAAAGACTATTTTCGGATGCCGATCTTCTTGGAAGATGATGATGTCGGTCTATTTTGGCCTGGAAGTTTCAGACAGACTGATGAAAGGGGTGGTGTTAATTTGGGGCATGGTGAGCATGCTCATAATTCAAATACTTGTTTTGTAGTAGCAACTGCACCTCCAGCACAAACATCTGCATCTCCTGATCTCACTCTGAGGCTTTAA 717 0.4519 MMTPNLNLEPEDDFKVLIQVGSDKSIRETSHDLTKADPDPGPVSLDLSLNFNPGDEELKVTSDTNCEVGPETHASASAIPRVFSCNYCWRKFFSSQALGGHQNAHKRERTMAKHAMRMGMFAERYTSLASLPLHGSSFQSLGLEAHAAMHQGHVHHHSMRAPDIRAAAKFGKDYFRMPIFLEDDDVGLFWPGSFRQTDERGGVNLGHGEHAHNSNTCFVVATAPPAQTSASPDLTLRL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00112 238 SUPERFAMILY beta-beta-alpha zinc fingers 81 111 IPR036236 -
Gma20g00112 238 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 110 IPR013087 -
Gma20g00112 238 PANTHER ZINC FINGER PROTEIN 3-RELATED 7 238 - -
Gma20g00112 238 PANTHER ZINC FINGER PROTEIN JAGGED 7 238 IPR045320 GO:0003700
Gma20g00112 238 ProSitePatterns Zinc finger C2H2 type domain signature. 85 105 IPR013087 -
Gma20g00112 238 Gene3D Classic Zinc Finger 70 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00112 Gma-Chr20 1113113 1113829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00112 77 238 C2H2 Transcription Factor Family AT1G66140 44.086 6.64e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00112 - - gmx:100792169 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01669 07 34934558 34940032 Gma20g00112 20 1113113 1113829 GST