Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00109 ATGAGTCCCTTGGGTATCTCAGGTTTGGCACACTTGTTTGGCATCTTAGCATTCATCCTCTTGCTCGTTTGGTTGTTGCATTACCGTGAAGGAATTGATTATGATTCAGACAAGGGATTTCGCGTCTTCAATCGAAAGGAAAGTCAGGAAGTTTGTTCACATGCCCTGCATTTGATTGCTATAGTTCTTGGCATTGTTGGTTTGAATGCCGTTTTCAAGTTCCATGGTATGGAAAACATTCCCAATGTTTACAGCCTCCATTCATGGATTGGCATTGTCACCTTCTGCTTATTTGGATTGCAGTGGCTTTTTGGTTTCGTTGTGTTCATGCTTCAAGGAGCTTCAGTCAATACAAGAGCTAAAGTGCTACCATGGCACAAAGTTGGTGGTAGAGCACTGTTGTTCATGGCTGTGTGCGCTGCTGAAACAGGATTGATGGAGAAGTCTTGTTTCTTAACAAATTTAAAATTGTTACATGGGAGAGAATCTAATTTGATCAACTTCACGGGTCTTGCGATTCTCTTGTTTGGAGTTTTTGTAAACTTTTCTGTTGGTTTCTCTTAG 564 0.4113 MSPLGISGLAHLFGILAFILLLVWLLHYREGIDYDSDKGFRVFNRKESQEVCSHALHLIAIVLGIVGLNAVFKFHGMENIPNVYSLHSWIGIVTFCLFGLQWLFGFVVFMLQGASVNTRAKVLPWHKVGGRALLFMAVCAAETGLMEKSCFLTNLKLLHGRESNLINFTGLAILLFGVFVNFSVGFS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00109 187 Gene3D - 46 185 - -
Gma20g00109 187 Gene3D - 2 45 - -
Gma20g00109 187 Pfam Eukaryotic cytochrome b561 43 151 IPR006593 -
Gma20g00109 187 PANTHER CYTOCHROME B561-RELATED 45 186 IPR043205 GO:0016491
Gma20g00109 187 PANTHER CYTOCHROME B561-RELATED 4 44 IPR043205 GO:0016491
Gma20g00109 187 ProSiteProfiles Cytochrome b561 domain profile. 1 185 IPR006593 -
Gma20g00109 187 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 45 186 - -
Gma20g00109 187 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 4 44 - -
Gma20g00109 187 SMART 561_7 10 145 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00109 Gma-Chr20 1092292 1095890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00109 9 185 Chloroplast and Mitochondria Gene Families AT1G14730 46.798 5.40e-57 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00109 K08360 - gmx:100777650 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01679 07 35121712 35124456 Gma20g00109 20 1092292 1095890 GST