Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00075 ATGGCTCACCATTGTTCAAACAAGGCCTTAGGTTGCTACCTCCTATTTTCCATTGTTGTGTCTATCTTTTCAACCTTTACTTGTGCTCATTTTGATGGATTTTTCCCTAATGAACCAATAATATTCCAAGACACTAATGCTTATGCACCAACACTTGAAGTTGATGTTATTGAACCAACTCTAAAAATTGAAGATGATTCACAACTTGCTCCACCACCTGTAGTTGGTGCCATTCCACCAACTTTCGAAGTTCAAAATGATGCACCACTTCTAAATGAAAGGCTAAAAAAGGCCTATGTTGCTCTTCAAGCATGGAAAGAGGCTATTTACTCTGACCCTTTGAACACAACCGGTAATTGGGTTGGTGAAGATGTTTGCTCCTACAACGGTGTGTTTTGTGCTCCCGCCATTGATGATCCCACATTGAATGTGGTTGCTGGTATTGATCTCAACAACGCAGACATTGCCGGTCATCTCCCAGAAGAGTTAGGCAACTTGTTAGATATTGCACTTTTCCACATTAACTCCAATAGATTTTGTGGAATTGTGCCTGAGACGTTGGAGAATCTTACACTTCTATATGAGTTTGACATTAGCAACAATCGCTTTGTTGGTGGTTTTCCATCTGTGGTTCTCAAATTGCCAAACTTGAAGTACTTGGATATCAGATACAATGACTTTGAAGGACCTTTACCTCCAAAGCTATTTGAGAATGATCTTGATGCAATATTTATGAACAACAATCGTTTCACATCTATCATCCCAGATACTCTTGGAAAATCCAAGGCCTCGGTTGTGACCTTTGCTAACAACAAATTCACAGGTTGCATTCCAAAGTCTATTGTGAACATAAAAAACATGAATGAGATTGTGTTCACGGGCAATGACCTTGGAGGTTGCTTGCCACAAGAGATTGGAATGTTAGAAAGTGTAACTGTTTTGGATGCTAGCCATAATGGGTTTATAGGGACTCTTCCTAACTTGTCAGGATTGAAGAATGTCGAGGTCATAAACATTGAGCACAGCAAGCTTAGTGGATATGTGTCTAACACTGTTTGCCAACTTCCTTTGTTGAAGAACTTCACATTCTCTAACAACTACTTTAATGGGGAAGCTCAAGCTTGTGTGCCTTCTTCCAATTCATTGGTGGCTTTGGATGACTCAAAAAATTGCTTATCAGGAAGGAAGAATCAAAAGTCATCCAAGCAATGTTTTCCATTGCTAACTCGCCTTGTGGATTGTAGCAAACATTGTGGTAGAGGCAAAGGTAATGACAATGGGAGTACTTTATCACCTTCACCTGTCCCAAAACCACCTAAGTCTAACCCTCCAAAGCTCGAGACACCAAAAGCTCAAccacctccaaccccaaaggttgagccacctccaacaccaaagTTCCAAAAAAAAATTTTGTGCAAAGCTAAACTCCATCTTCATGAATTCTAA 1449 0.3858 MAHHCSNKALGCYLLFSIVVSIFSTFTCAHFDGFFPNEPIIFQDTNAYAPTLEVDVIEPTLKIEDDSQLAPPPVVGAIPPTFEVQNDAPLLNERLKKAYVALQAWKEAIYSDPLNTTGNWVGEDVCSYNGVFCAPAIDDPTLNVVAGIDLNNADIAGHLPEELGNLLDIALFHINSNRFCGIVPETLENLTLLYEFDISNNRFVGGFPSVVLKLPNLKYLDIRYNDFEGPLPPKLFENDLDAIFMNNNRFTSIIPDTLGKSKASVVTFANNKFTGCIPKSIVNIKNMNEIVFTGNDLGGCLPQEIGMLESVTVLDASHNGFIGTLPNLSGLKNVEVINIEHSKLSGYVSNTVCQLPLLKNFTFSNNYFNGEAQACVPSSNSLVALDDSKNCLSGRKNQKSSKQCFPLLTRLVDCSKHCGRGKGNDNGSTLSPSPVPKPPKSNPPKLETPKAQPPPTPKVEPPPTPKFQKKILCKAKLHLHEF 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00075 482 MobiDBLite consensus disorder prediction 432 464 - -
Gma20g00075 482 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 9 452 - -
Gma20g00075 482 Pfam Leucine rich repeat N-terminal domain 100 133 IPR013210 -
Gma20g00075 482 SUPERFAMILY L domain-like 100 394 - -
Gma20g00075 482 MobiDBLite consensus disorder prediction 422 467 - -
Gma20g00075 482 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 452 - -
Gma20g00075 482 Gene3D Ribonuclease Inhibitor 265 417 IPR032675 -
Gma20g00075 482 Gene3D Ribonuclease Inhibitor 95 264 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00075 Gma-Chr20 819763 822107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00075 1 416 Trihelix Transcription Factor Family AT3G19020 57.007 5.91e-165 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00075 - - gmx:100804536 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02087 07 42635141 42636775 Gma20g00075 20 819763 822107 GST