Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00065 ATGGGGACACAAAAGTCTAATATGTTTGATGCACCTTTCAAATACATGGTGCCTGAAGATAAGGAAATTCCCGACAGACCTTTGCCATCACATTGGACTCCTTCTATGCAGGCATATAACACTTCTGGGTCTACTCCAACTCCCTTTTTAAATCAACAGGCAGCTGGTTCTCACATGCCTCTCTACATGTGGGTAAATCAGGTAAACAACACACTACTTCAATCCGATGCTTTGCATGATCCAAGGATGCTCTCCAGTAAACCCACAGTAGCTGGGGATGCTGTACTGGCTTTTTCAGAAATAGTACACAGGACTTTTGGCGAACAAAACCTGAATTCAATAAAAAAATGTGCCAGAAACTTGCAACCAAAAAGTTTAATAACTAAGGAATCAACAGAAAATGGAAGCAAATCTTCAATAATGAAAACCAATAGGGATGGAGTGTTGTGCAGTGAAGCAAATGGAAACAAGGGATCACCAGATGAAGATCACATTACTAATGATTTTCCTTCAACTAAGAAGCAGCACTGTAATTTGATGCTTGAAAATGCAAGTTCAACCAAACTGAATCAGGATTTGGAGACAGGCCTAGATGCATCTGACGCTAATGCTCAACTTGTAAATTTGGAAAAGGATGAAATAAGAAGAGAAAGAAAAAGACAGTCAAACAGGGAATCGGCGAGGAGATCAAGGATGCGGAAAGAGAAAGAATGTGAAGAGCTACATAAACAAATGGAAATGCTTAAGGATGAAAACTCCGTGCTCACACAGAGGCTCAAGAGTCTTTCTGAGGAGTGCCTGGAGATCTGCAATGAAAACGATGCCATCGAGGAAGAGCTGATTAAAATGTATGGACCAGAATCAATAGCAGATCTATTGCTCTTCAAGCCTACCTGA 897 0.4069 MGTQKSNMFDAPFKYMVPEDKEIPDRPLPSHWTPSMQAYNTSGSTPTPFLNQQAAGSHMPLYMWVNQVNNTLLQSDALHDPRMLSSKPTVAGDAVLAFSEIVHRTFGEQNLNSIKKCARNLQPKSLITKESTENGSKSSIMKTNRDGVLCSEANGNKGSPDEDHITNDFPSTKKQHCNLMLENASSTKLNQDLETGLDASDANAQLVNLEKDEIRRERKRQSNRESARRSRMRKEKECEELHKQMEMLKDENSVLTQRLKSLSEECLEICNENDAIEEELIKMYGPESIADLLLFKPT 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00065 298 Gene3D - 214 271 - -
Gma20g00065 298 PANTHER BZIP TRANSCRIPTION FACTOR 1 298 - -
Gma20g00065 298 Pfam bZIP transcription factor 212 268 IPR004827 GO:0003700|GO:0006355
Gma20g00065 298 SUPERFAMILY Leucine zipper domain 214 269 IPR046347 GO:0003700|GO:0006355
Gma20g00065 298 SMART brlzneu 211 275 IPR004827 GO:0003700|GO:0006355
Gma20g00065 298 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 213 265 IPR004827 GO:0003700|GO:0006355
Gma20g00065 298 MobiDBLite consensus disorder prediction 214 236 - -
Gma20g00065 298 CDD bZIP_plant_GBF1 216 266 IPR045314 GO:0003700|GO:0006355
Gma20g00065 298 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 218 233 IPR004827 GO:0003700|GO:0006355
Gma20g00065 298 Coils Coil 204 279 - -
Gma20g00065 298 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 298 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00065 Gma-Chr20 728625 733177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00065 1 292 bZIP Transcription Factor Family AT4G36730 30.794 9.74e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma20g00065 bZIP_1 1.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00065 K09060 - gmx:102665715 601.668