Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00060 ATGGATTTTCAAATCTTTGATATGTTAGCTCCTATTTCCCTTTTCCTCTTCATGATTGTGGCATTGAAATTAGGTAGAAATCTCACCAAAACCAAGCCTCAAGTTCTAGCTGGCAAAATAATAGGCTATGATAAGAAAACCATAGCTTTTGCACCTTATGGAAACTATTGGAGACAGCTACGTAAAAATTGCACATTGGAGCTCTTCACCATAAAACGTATCAATTCATTCAGGCCAATAAGAGAAGAAGAGTTCAACATCCTCATCAAGAGGATTGCTTCAGCAAATGGATCAACCTGCAATCTCACTATGGCAGTGCTTTCATTGTCATATGGAATTATTTCTAGGGCCGCGTTTCTGCAAAGACCTAGAGAGTTCATATTATTGACAGAACAAGTGGTGAAGACTTCTGGAGGCTTTAACATAGGAGAGTTCTTCCCTTCTGCTCCATGGATTCAGATTGTTGCTGGTTTCAAACCTGAGCTTGAGAGGTTGTTCATAAGAAATGATCAGATATTGCAAGACATCATCAATGAACATAAAGATCATGCAAAGCCAAAAGGTAAAGAAGGCCAAGGTGAGGTAGCGGAAGATATGGTAGATGTTCTTCTAAAATTTCAAGATATGGGTGGTGAGAATCAGGATGCTAGCTTAACTGATGACAACATCAAGGCTGTAATTGAGAAAATGTTTGCTTCTGGAGGTGAGACATCAGCAAATAGCATAAACTGGACAATGGCTGAGTTGATGAGGAATCCAAGGGTGATGAAGAAAGCACAAGCTGAGGTGAGAGAGGTATTCAATATGAAAGGAAGAGTTGATGAAACTTGCATCAATCAAATGAAATACTTGAAAGCAGTTGCCAAAGAGACTATGAGGTTACATCCTCCAGTTCCTCTTTTATTCCCAAGAGAATGTGGAGAAGCATGTGAGATTGATGGGTATCATCATATACCAGTCAAAAGTAAAGTAATTGTGAGTGCTTGGGCAATTGGAAGAGATCCAAAGTACTGGAGTGAAGCAGAGAGGCTTTATCTAGAGAGATTCTTTGCTAGCTCTATTGACTACAAAGGGACTAGTTTTGAGTTCATTTCATTTGGTGCCGGAAGAAGAATATGCCCAGGTGGCTCATTTGGTTTGGTAAATGTTGAGGTGGCACTTGCATTTTTGTTGTATCACTTTGATTGGAAGCTTCCCAATAGAATGAAAACTGAGGACTTGGACATGACTGAACAGTTTGGGTTAACTGTTAAAAGAAAAAAGGACCTGTATTTGATTCCCTCCCTTGCAACATAA 1296 0.3943 MDFQIFDMLAPISLFLFMIVALKLGRNLTKTKPQVLAGKIIGYDKKTIAFAPYGNYWRQLRKNCTLELFTIKRINSFRPIREEEFNILIKRIASANGSTCNLTMAVLSLSYGIISRAAFLQRPREFILLTEQVVKTSGGFNIGEFFPSAPWIQIVAGFKPELERLFIRNDQILQDIINEHKDHAKPKGKEGQGEVAEDMVDVLLKFQDMGGENQDASLTDDNIKAVIEKMFASGGETSANSINWTMAELMRNPRVMKKAQAEVREVFNMKGRVDETCINQMKYLKAVAKETMRLHPPVPLLFPRECGEACEIDGYHHIPVKSKVIVSAWAIGRDPKYWSEAERLYLERFFASSIDYKGTSFEFISFGAGRRICPGGSFGLVNVEVALAFLLYHFDWKLPNRMKTEDLDMTEQFGLTVKRKKDLYLIPSLAT 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00060 431 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 366 375 IPR017972 GO:0005506|GO:0016705
Gma20g00060 431 Gene3D Cytochrome P450 20 425 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00060 431 PRINTS P450 superfamily signature 233 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00060 431 PRINTS P450 superfamily signature 364 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00060 431 PRINTS P450 superfamily signature 286 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00060 431 PRINTS E-class P450 group I signature 242 268 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00060 431 PRINTS E-class P450 group I signature 327 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00060 431 PRINTS E-class P450 group I signature 373 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00060 431 PRINTS E-class P450 group I signature 285 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00060 431 PRINTS E-class P450 group I signature 363 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00060 431 PRINTS E-class P450 group I signature 222 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00060 431 PANTHER CYTOCHROME P450 FAMILY PROTEIN 29 428 - -
Gma20g00060 431 PANTHER CYTOCHROME P450 71B11-RELATED 29 428 - -
Gma20g00060 431 Pfam Cytochrome P450 38 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00060 431 SUPERFAMILY Cytochrome P450 32 426 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00060 Gma-Chr20 689190 690964 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00060 31 428 Cytochrome P450 AT3G26210 41.849 1.14e-101 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00060 - - gmx:100801936 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01493 07 20847070 20854700 Gma20g00060 20 689190 690964 GST