Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00046 ATGCAAGATGTGATTCTTGATCTTGCTTACCTAGTGTATAGGTTTATGTGGAGTGGTGATGAATGGACACCTGTTTCATCAAGAAGAGCACATTTATCTTTCAAACTCGGTTCATGTCTCTTCCTTGACGTGCTTCCCTCATCCTTCAATTTCCTCTCCTTACAAATCCAACACCCTCTTCGTTTCATTCTCTCTATCTCTCTCTCTCACTCTTTTCTGTCATCTGCGCAACTTCATTCATTCAGGCTAAATGGGGAGGATCAAACCTCAGGCTCTGCTACAGCAAAGCAAAAGGAAGAAGGGGCCTTCTCGCATAAACATTGGTCCAACAGGACAAGACTTCAACCAGAGAGCTATATATCAGTCTCTGAGGATGAAAATACATCTGTGGAATCCAAAAAATCTGATCTACCTGGATATGCTGTTGTAATTACCTCTAAAGGTTCTATTATAGTAGAACTTTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTCATAGATTTATGTCAAAAAGGGCACTTCAAGGGGATGCTTTTTCACCAAGTAATTAAACACTATATAATTCAGGCAGGTCATAACAAAGGGCCTGGAGCTACTGAAGATTGGAACCTGTTAGGAAAGAAATACGCAAGTATGAGACACGAAGCATTCATGCTCGGAACATCGAAGGGAAAATACTTTAACAAAGGATTTGATCTTTTCATCACAACTGCACCAATACCAGATTTAAATGAAAAGCTTATTGTGTTTGGCCGAGTCATCAAGGGACAGGATATTGTTCAGGAAATTGAAGAAGTGGATACAGATGAACATTACCAACCAAAACTTACTATTGGGATACTTGATGTGGCTCTTAAACAGATAGTGTGA 873 0.3963 MQDVILDLAYLVYRFMWSGDEWTPVSSRRAHLSFKLGSCLFLDVLPSSFNFLSLQIQHPLRFILSISLSHSFLSSAQLHSFRLNGEDQTSGSATAKQKEEGAFSHKHWSNRTRLQPESYISVSEDENTSVESKKSDLPGYAVVITSKGSIIVELYKESAPEVVDEFIDLCQKGHFKGMLFHQVIKHYIIQAGHNKGPGATEDWNLLGKKYASMRHEAFMLGTSKGKYFNKGFDLFITTAPIPDLNEKLIVFGRVIKGQDIVQEIEEVDTDEHYQPKLTIGILDVALKQIV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00046 290 Gene3D - 124 289 IPR029000 -
Gma20g00046 290 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 154 169 IPR002130 GO:0000413|GO:0003755
Gma20g00046 290 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 246 261 IPR002130 GO:0000413|GO:0003755
Gma20g00046 290 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 180 192 IPR002130 GO:0000413|GO:0003755
Gma20g00046 290 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 233 245 IPR002130 GO:0000413|GO:0003755
Gma20g00046 290 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 104 290 - -
Gma20g00046 290 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 104 290 - -
Gma20g00046 290 SUPERFAMILY Cyclophilin-like 138 285 IPR029000 -
Gma20g00046 290 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 143 284 IPR002130 GO:0000413|GO:0003755
Gma20g00046 290 CDD cyclophilin 145 283 - -
Gma20g00046 290 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 148 286 IPR002130 GO:0000413|GO:0003755
Gma20g00046 290 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00046 Gma-Chr20 553841 560261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00046 139 286 U-box Gene Family AT5G67530 27.742 8.12e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00046 - - gmx:100796043 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01466 07 19872748 19877068 Gma20g00046 20 553841 560261 GST