Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00038 ATGCTCCCTTCGGTTCTACAAAATTTGTCCAATATCCATTATCTTACAACCGAAGCTTTGAAACATTATGGAGGCACCCTAATGTTTAAAGGACCCTGGTTCACAAATACCAACTTTATCCTCACCAGCGATCCCATGAACGTGCACCACATCACTAGCAAGAATTTTGGCAACTATGGGAAAGGGTCAAATTTCAATGAGATTTTTGAAGTTTTAGGAGGTGGGATTATTAACTCTGATGATCTCCATGCATGGAAACAAGAGAGAACAATGCTCCACTCATTGCTTAAAAGGGAAAGCTTTAAGATCTTCCTTCAAAAAACCATTCAGAAGAAGCTGGAGAATTGCTTAATACCCTTTCTTGACCATGCATCCAAAGCTGGAGCTGAAGTGGACTTGCAAGATGCCTTTCAGAGGTTTACCTTTGACAATGCTTGCTGTATGGCGTTTGGATATGATCCTAATTGCCTTCCAAACAAGTTCAGTACTAAGCTCTCACACTTTGCTTATCAGAAAGCTTTAATTGTGCTTGAGGATGTAGCATTCCACAGGCACATCACACCAAGATGTTTGTGGAAGCTGCAGGAGTGGCTTCAAATTGGTAAAGAAAAGAAGTTTAAGGAGGCCATAGAAGCTTTTGATAAGTTCTTGTTTGAACGTATTGCATCTAAACGCGAAGAGCAAAGTAGATGCAATAATCACACCAAAAAAGAAGATGACAATACTCATTCTGACCTGATAAGGGTGCTAATGGAGGAAGGAGCTGAAAAAGGGAAAATAATGGATGACAAGTATCTTAGAGACACTGCATTTACCCTTGTTTCTGCTGGAAGTGGCACAGTTAGTGCAGGTCTCAGTTGGTTCTTTTGGCTCGTTTCAACTCATCCAGATGTGGAAGCTAAAATTTTTCAAGAGATAAAAGATAACTGTGTGAATCAAGATGGAGATTGGATTGCTTCAAGTGTGGAAGAGTTTGGTAAGCTAGTTTACCTCCATGGAGCTATATGTGAAGCCTTGAGGCTTTTTCCTTCAATTCCCTTTGACCACAAGTGTGCAATCAAATCTGATATACTTCCAAGTGGACACCATGTTAGTCCAAATACCATGATATTATACTCTTTGTACTCAATGGGAAGGATGGAACAGATTTGGGGAGATGACTACTTGGACTTTAAGCCAGAGAGATGGATTTCAGAGAGAGGAAACATTATACACATTCCATCTTACAAGTTCATAGCTTTCAATGCAGGGCCAAGAAGTTGTTTGGGTAAAGATGTTACCCTTATTGAAATGAAGATGGTTGCAGTTGCTTTACTGTGGAGGTTTCACATGCAGGTGGTGGAAGGCCATCCTATAACCCCAAGGCTTTCTATGATACTTGCCATGGAACATGGCTTGAAGGTCAAAGTTACTGAAAGATGCACTTGA 1428 0.4048 MLPSVLQNLSNIHYLTTEALKHYGGTLMFKGPWFTNTNFILTSDPMNVHHITSKNFGNYGKGSNFNEIFEVLGGGIINSDDLHAWKQERTMLHSLLKRESFKIFLQKTIQKKLENCLIPFLDHASKAGAEVDLQDAFQRFTFDNACCMAFGYDPNCLPNKFSTKLSHFAYQKALIVLEDVAFHRHITPRCLWKLQEWLQIGKEKKFKEAIEAFDKFLFERIASKREEQSRCNNHTKKEDDNTHSDLIRVLMEEGAEKGKIMDDKYLRDTAFTLVSAGSGTVSAGLSWFFWLVSTHPDVEAKIFQEIKDNCVNQDGDWIASSVEEFGKLVYLHGAICEALRLFPSIPFDHKCAIKSDILPSGHHVSPNTMILYSLYSMGRMEQIWGDDYLDFKPERWISERGNIIHIPSYKFIAFNAGPRSCLGKDVTLIEMKMVAVALLWRFHMQVVEGHPITPRLSMILAMEHGLKVKVTERCT 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00038 475 Pfam Cytochrome P450 11 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00038 475 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 470 - -
Gma20g00038 475 Gene3D Cytochrome P450 3 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00038 475 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00038 475 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00038 475 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00038 475 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00038 475 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00038 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Gma20g00038 475 PANTHER CYTOCHROME P450 5 470 - -
Gma20g00038 475 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00038 475 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00038 475 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00038 475 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00038 475 SUPERFAMILY Cytochrome P450 5 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00038 Gma-Chr20 486464 487891 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00038 1 474 Cytochrome P450 AT4G39490 45.473 7.51e-150 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00038 - - gmx:100791312 975.696