Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00020 ATGAAGAATCTCCACCTCCCCACCGCCGCCGACGCCGAATCCCTCGCCTTCGAACTCCACACCGACGGGGACCAACCCGAATCCGACATCTCCTACGGCCTCAACGTTCGTGCCGACAAAAATCCAGAAGGAAACAACAAAGACGACAGTGATGGTGCTGCCCCACGGCGTCGAGTTCCGCTGGAGGCCACGGCGCTGCAGAAGCTGAAAAGCGACCTGGAGAGGCTGCCGGAGGACCAGGGGATGGAGGAGTTCAAGGATGTCGCCGTCGAGGGCTACGGCGCGGCACTGCTCGCCGGCTATGGCTGGAAGGAAGGAATGGGGATTGGGAGGAACGCCAAGGAGGACGTGAAGGTGGTGGAGATCAAACGGAGAACTGCCAAGGAAGGATTAGGGTTTGTCGGTGATGCTCCTGCGGCGCTCGTTCTGAGCAACAATGAGAAGGACAACAAGAAGAAGGAGAAGAAGGAGAAGGTTGTTAGGATTGTTGGGGGAAGAGATGCTGGGTTGAAGGGTAGTGTTGTGTCTAGGATTGGGGATGATTATCTTGTTTTGGAGCTTTCAAGAAGTGGAGAGAAGGTGAAGGTGAAGGTGAAGGTTGGTGATGTTGCTGAATTGGGTTCTAAGGAGGAAGAGAGGTGTTTGAGGAAATTGAAGGAGTTGAAGACTCAGCGTGAGGATAAAGTGTCAAAGAGTAAGCGCGGTAGGGATGAGGTGgaggagaagagaggggatgttaataggagaaaggagaagagagttgatgttggtaggaaagaggagaggagagtggTGGATCATAGGAAGGTTTCCTGGCTTACAAGTCACATTCGTGTTAGGGTGATTAGCCGGGatttgaaaggggggcggttgtatttgaagaagggggaggttCTGGATGTTGTTGGGCCTACTACTTGTGATATATCTATGGATGAGAACCGGGAGATTGTTCAAGGAGTGTCACAAGATGTTCTCGAGACAGTGATACCGAAACGTGGGGGACCGGTGCTTGTGTTGGCTGGTAAATACAAGGGTGTGTACGGGAGTATGGCAGAGAGGGATTTGGACCAGGAAACTGCCATAGTTAGGGATGCTGATACCCATGAGCTGCTCAATGTGAAACTTGAACAGATTGCAGAGTATATAGGGGACCCAAGCTTATTGGGACATTGA 1176 0.4719 MKNLHLPTAADAESLAFELHTDGDQPESDISYGLNVRADKNPEGNNKDDSDGAAPRRRVPLEATALQKLKSDLERLPEDQGMEEFKDVAVEGYGAALLAGYGWKEGMGIGRNAKEDVKVVEIKRRTAKEGLGFVGDAPAALVLSNNEKDNKKKEKKEKVVRIVGGRDAGLKGSVVSRIGDDYLVLELSRSGEKVKVKVKVGDVAELGSKEEERCLRKLKELKTQREDKVSKSKRGRDEVEEKRGDVNRRKEKRVDVGRKEERRVVDHRKVSWLTSHIRVRVISRDLKGGRLYLKKGEVLDVVGPTTCDISMDENREIVQGVSQDVLETVIPKRGGPVLVLAGKYKGVYGSMAERDLDQETAIVRDADTHELLNVKLEQIAEYIGDPSLLGH 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00020 391 MobiDBLite consensus disorder prediction 225 258 - -
Gma20g00020 391 SMART kow_9 330 357 IPR005824 -
Gma20g00020 391 SMART kow_9 153 180 IPR005824 -
Gma20g00020 391 PANTHER G PATCH AND KOW-CONTAINING 1 389 IPR045166 GO:0000398
Gma20g00020 391 SMART G-patch_5 88 134 IPR000467 GO:0003676
Gma20g00020 391 MobiDBLite consensus disorder prediction 41 56 - -
Gma20g00020 391 MobiDBLite consensus disorder prediction 17 59 - -
Gma20g00020 391 Pfam G-patch domain 77 133 IPR026822 -
Gma20g00020 391 ProSiteProfiles G-patch domain profile. 90 136 IPR000467 GO:0003676
Gma20g00020 391 Gene3D - 276 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00020 Gma-Chr20 246100 247275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00020 267 364 C2H2 Transcription Factor Family AT1G55460 32.653 3.37e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00020 K13101 - gmx:100784934 705.286