Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00016 ATGACGTTGTTGAAGTTCCATCAAGTGTGGAAGCCAGCTTTGGTGATGATTATAGTTAACTTAGCTCTGGCTTTTGTCAATATATTTCTGAAGAAGGTTCTTAATGAAGGAGTGGACTACTTGACCATCCTAACCTATCGACAAGCAATTTCAGCCATTTTCTTGACACCTATTGCTTGTTTCTATGAAAGGAAAAGGAAGCTGGAGGGCCACATAATATGTCTGCTTTTCCTAAGTGCTCTTGTGGGGGTAACACTCACTCAATGTCTGTATCTTATTGGACTAGAATATACATCTGCCACGTTCGCATGTGCTTTCCTAAATATGGTACCTGTATTCACCTTTATTATGGCGCTGCCACTGGGGATAGAGAAGGTGAACATGAAAAATCTGAGTGCTAAGGCAAAGGTGTTGGGAACTTTTGTGTGTATTGGTGGAGCTTTGATGTTGATCCTTTATAAAGGAGTGCCCTTAATCAAACAACAACCAGAGCACTTAGCAGACAAAGGCACAATAACATCACCAGCCTCCAAGTTAAAGAAATGGATCATAGGTTCACTGCTTCTAACTGCAGGATGCCTCTTGTGGTCTTCATGGTTTCTAATGCAAGCAAGGATTAGCAAAAAGTATCCATGTCAATACTCTAGCACTGCCATTTTGTCCTCTTTTGCCGCCATTCAATCAGCAATATTAACTTTGGTCATCGATAGAAGTAATGCCAAGTGGATTCTCAAAGGGAAGTTAGAGATAATGACTGTTGTATATGCTGGGCTGGTAGGTTCAGGCTTGTGCTATGTGGCAATGTCATGGTGTGTGAAACAAAGGGGTCCAGTATTTACTTCAGCATTTACCCCTCTTCTACAAATGTTCGTGGCTGTGCTTGATTTCTCTATATTACATGAGGAAATTTATCTTGGAAGTATTGCAGGATCAGTCTTGGTTATTTCTGGCACGTATATTCTACTTTGGGGTAAAAGTAAAGAGGAAGAACAAAGTGCCGTGAAGGGTACTCAAGAAAGTCAAGAAGATGAAGAAAGTAAGAATAATTTGGGGGCCAGTCCTAATGTACCTTCAAAGCTAAGGCCAAATGGGGAACAAGGATTCTCTGAATTACAAGTGAAGCAGTTAGCTATTACAGTAACTAAAAGTTGA 1152 0.4054 MTLLKFHQVWKPALVMIIVNLALAFVNIFLKKVLNEGVDYLTILTYRQAISAIFLTPIACFYERKRKLEGHIICLLFLSALVGVTLTQCLYLIGLEYTSATFACAFLNMVPVFTFIMALPLGIEKVNMKNLSAKAKVLGTFVCIGGALMLILYKGVPLIKQQPEHLADKGTITSPASKLKKWIIGSLLLTAGCLLWSSWFLMQARISKKYPCQYSSTAILSSFAAIQSAILTLVIDRSNAKWILKGKLEIMTVVYAGLVGSGLCYVAMSWCVKQRGPVFTSAFTPLLQMFVAVLDFSILHEEIYLGSIAGSVLVISGTYILLWGKSKEEEQSAVKGTQESQEDEESKNNLGASPNVPSKLRPNGEQGFSELQVKQLAITVTKS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00016 383 MobiDBLite consensus disorder prediction 332 368 - -
Gma20g00016 383 PANTHER WAT1-RELATED PROTEIN 10 349 IPR030184 GO:0016021|GO:0022857
Gma20g00016 383 PANTHER WAT1-RELATED PROTEIN 10 349 - -
Gma20g00016 383 MobiDBLite consensus disorder prediction 332 346 - -
Gma20g00016 383 MobiDBLite consensus disorder prediction 347 362 - -
Gma20g00016 383 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020|GO:0016021
Gma20g00016 383 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Gma20g00016 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 327 - -
Gma20g00016 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00016 Gma-Chr20 198338 201651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00016 1 330 Nodulin-like Gene Family AT1G11460 41.141 5.00e-82 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00016 - - gmx:100783337 750.74