Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00014 ATGTCCAACTCTCACGGAGCCACTAACGCCGTCACCACCACCAACCACTCCAACAACAACACAGTTGTCGACCACCACCAGCAACCAACCACCACCGCCCTCGCCGTCAAGAAACCGCCGTCCAAGGACCGCCACAGCAAGGTCGACGGCCGCGGCCGCCGCATTCGCATGCCGATCATCTGCGCCGCGCGCGTCTTCCAGCTCACGCGCGAGCTCGGTCATAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGTCAGGCCGAGCCCTCCATCATCGCCGCCACCGGCACCGGCACCACTCCGGCGAGCTTCTCCACCGTCTCCGACCACAAGCCCCTCCTCCCTCCCCCCACCCCCTTCATCCTCGGCAAACGCATTCGCCCCGACGACGACAACTCCGCCAAAGACGACACCGTCTGGAGCTTCGCCGCCCCCGAACTCGTGTCGGTGTCGCCGCAGAATTCCTTGTTTcaccaccaccaccaccaccaccaccaGCAGGCCGCCATGGGAGAGGCCTCGGCCGCCAGGCTCGGGAATTACCTCCCCGGCCACCTCAATTTGCTTGCCTCGTTGTCCGGCGGCGGCCACGGGAATTCCGGCCGGCGGGACGACGAGCCTCGCTGA 630 0.6365 MSNSHGATNAVTTTNHSNNNTVVDHHQQPTTTALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSDHKPLLPPPTPFILGKRIRPDDDNSAKDDTVWSFAAPELVSVSPQNSLFHHHHHHHHQQAAMGEASAARLGNYLPGHLNLLASLSGGGHGNSGRRDDEPR 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00014 209 MobiDBLite consensus disorder prediction 1 35 - -
Gma20g00014 209 MobiDBLite consensus disorder prediction 38 53 - -
Gma20g00014 209 PANTHER TRANSCRIPTION FACTOR TCP21-RELATED 13 136 - -
Gma20g00014 209 PANTHER TRANSCRIPTION FACTOR TCP21-RELATED 139 206 - -
Gma20g00014 209 MobiDBLite consensus disorder prediction 103 128 - -
Gma20g00014 209 ProSiteProfiles TCP domain profile. 41 95 IPR017887 -
Gma20g00014 209 Pfam TCP family transcription factor 41 112 IPR017887 -
Gma20g00014 209 MobiDBLite consensus disorder prediction 1 53 - -
Gma20g00014 209 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 13 136 IPR005333 GO:0003700
Gma20g00014 209 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 139 206 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00014 Gma-Chr20 187491 189185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00014 17 209 TCP Transcription Factor Family AT5G23280 59.414 1.88e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma20g00014 TCP 8.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00014 K16221 - gmx:100782271 379.793