Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00012 ATGGTTTCCTGCTTGGTTCTGATTCTAGGTGTTTCATCATTGGCTTCAGCATATCTGAAAGTGGGTTTCTACAGCTCCGCGTGTCCATCTGCCGAGGAAATAGTGAGAAGCACAGTAAACAAAGCAATTTCAGACAACGCGGGCATAGCTGCTGGACTCATTAGAATGCATTTCCATGATTGCTTTGTGAGGGTAAGTTCAAAGGGTTGTGATGGTTCTGTGTTACTAGCATCTGCACCGGGTAATCCAATAGCCGAGAGAGACAATTTCGTGAACAACCCAAGCTTGCATGGCTTCGAGGTGATCGAGGAGGCCAAGACCCAATTAGAGGCTGCATGCCCTCAAACGGTGATGAAGTGCCCCAGAATCTGCCTGCACCAACCTCCAGTGCAGATGAAATGGTCACACTTTCAGGAGCGCATTCAATAG 429 0.4802 MVSCLVLILGVSSLASAYLKVGFYSSACPSAEEIVRSTVNKAISDNAGIAAGLIRMHFHDCFVRVSSKGCDGSVLLASAPGNPIAERDNFVNNPSLHGFEVIEEAKTQLEAACPQTVMKCPRICLHQPPVQMKWSHFQERIQ 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00012 142 PANTHER PEROXIDASE 25-RELATED 12 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g00012 142 SUPERFAMILY Heme-dependent peroxidases 19 117 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma20g00012 142 Gene3D - 19 127 - -
Gma20g00012 142 Pfam Peroxidase 35 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g00012 142 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g00012 142 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g00012 142 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g00012 142 ProSiteProfiles Plant heme peroxidase family profile. 18 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g00012 142 PANTHER PEROXIDASE 12 118 - -
Gma20g00012 142 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00012 Gma-Chr20 181659 182180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00012 1 117 Peroxidase AT5G39580 48.718 2.46e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00012 K00430 - gmx:100815350 201.445