Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00004 ATGTTTCCTCAGGAGAATCATAGTAACGGCTATCAGCATCAGCAGGGTTACAGTCACAGAGAGCGAGTCCGTCGGGGCACTTGCAGGTCACGTGCCTCCACTTCCTCACACTCTCACTCCGTTAGGGTTTACGACCAACCTCGTCCTCCTTGCACTGATTTCGACGTCGCCTATTTCCATTCCTACGCTCACCTTGGCATCCACCAAGAGATGATCAAGGATCGTGTGCGTACTGATACTTATAGGGATGCAATCATGCAGCATCAGAGTTTCATTGCAGGCAAAGTTGTCGTTGATGTTGGATGCGGTACAGGAATCCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAACGGGTGTATGCAATTGATGCCAGTGACATTGCCCTGCAGCAGGCAAATGAAGTTGTGAAAGCAAATAACTTGTCTGATGTTGTTGTTGTATTGCATGGGCGAGTTGAGGATGTTGAAATTAATGAAGAAGTGGATGTTATAATTTCCGAATGGATGGGCTATATGCTTCTGTATGAGAGCATGCTTGGAAGTGTTATTAATGCTAGAGATCGTTGGCTCAAACCTGGTGGTCTTATTCTTCCTTCAAGTTCAACGTTGTACATGGCTCCTGTCACTCATACGGACAGATACAGTGACAGTGTTGACTTCTGGCGCAATGTTTATGGAATTGATATGTCTGCCATGGTATCACTGGCTAAACAATGCGCATTTGAAGAACCTTCCGTGGAGACTATAACTGGTGAAAATGTCTTGACATGGCCACATGTGGTAAAATATATTGATAGTTATTCTGTTACCATCCAAGAGTTAGAATCTGTAACAGCCAAGTTTAAGTTCAATTCCATGATGCGAGCACCACTGCATGGTTTTGCATTTTGGTTTGACGTTGAATTTAATGGGCATGCAATACCATCAACCAATTATCATTCGACAACTTCATTTGTTGACAATCATCAGATGAATGGTAGTCAGAGAAAAAGGCGAACAAACCCAAATGAAGCACTGGTCTTGTCCACTGCACCTGAGGACCCTCCTACACATTGGCAGCAGACATTGATATACTTTTACGATCCTATAGAGCTGGAACAAGATCAACTAATTGAAGGTTTGGTAACATTGTCACAGAGCAAAGAAAATGCTCGATTTATGAATATTCACCTTGAATATACTTCAGGTGGTCGATCTTATGTGAAAGAGTCTGTTATGAGATGA 1224 0.4289 MFPQENHSNGYQHQQGYSHRERVRRGTCRSRASTSSHSHSVRVYDQPRPPCTDFDVAYFHSYAHLGIHQEMIKDRVRTDTYRDAIMQHQSFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAIDASDIALQQANEVVKANNLSDVVVVLHGRVEDVEINEEVDVIISEWMGYMLLYESMLGSVINARDRWLKPGGLILPSSSTLYMAPVTHTDRYSDSVDFWRNVYGIDMSAMVSLAKQCAFEEPSVETITGENVLTWPHVVKYIDSYSVTIQELESVTAKFKFNSMMRAPLHGFAFWFDVEFNGHAIPSTNYHSTTSFVDNHQMNGSQRKRRTNPNEALVLSTAPEDPPTHWQQTLIYFYDPIELEQDQLIEGLVTLSQSKENARFMNIHLEYTSGGRSYVKESVMR 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00004 407 Gene3D - 200 406 - -
Gma20g00004 407 CDD AdoMet_MTases 97 197 - -
Gma20g00004 407 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 55 407 IPR025799 GO:0016274|GO:0018216
Gma20g00004 407 MobiDBLite consensus disorder prediction 1 16 - -
Gma20g00004 407 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 47 404 IPR025799 GO:0016274|GO:0018216
Gma20g00004 407 Gene3D Vaccinia Virus protein VP39 52 198 IPR029063 -
Gma20g00004 407 Pfam Ribosomal protein L11 methyltransferase (PrmA) 93 169 - -
Gma20g00004 407 MobiDBLite consensus disorder prediction 1 44 - -
Gma20g00004 407 PANTHER BNAC03G41340D PROTEIN 47 404 - -
Gma20g00004 407 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 61 397 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00004 Gma-Chr20 32168 46171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00004 58 373 C2H2 Transcription Factor Family AT3G12270 38.182 7.89e-67 221