Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02494 ATGGCTTTACAGAACATTGGTGCTGCAAACAGTGATGATGCCTTTTACAGGCCTGCGTCTTACACGACCAAATATTTTGATTGTGAACTTGGGGCCCAGTCAAAATTTGATGAGAAGACCGGCACTTCTCACGTCAATGGAGCACATGATACTGTTAAGCTTGCTGGCCTTCTTGAGAACTTCATTAAGAAATATGTCCAGTGTTATGGTTGTGGAAATCCTGAAACTGAGATCATAATCACTAAGAACCAAATGATCCAGCTGAAATGCGCTGCTTGTGGTTGTGTCTGA 291 0.4261 MALQNIGAANSDDAFYRPASYTTKYFDCELGAQSKFDEKTGTSHVNGAHDTVKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQLKCAACGCV 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02494 96 Gene3D - 4 71 - -
Gma19g02494 96 Gene3D - 72 96 - -
Gma19g02494 96 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 17 IPR045196 GO:0003743|GO:0006413
Gma19g02494 96 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 17 96 IPR045196 GO:0003743|GO:0006413
Gma19g02494 96 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 13 68 IPR016189 GO:0003743|GO:0006413
Gma19g02494 96 SMART eIF2Bneu4 1 96 IPR002735 GO:0003743|GO:0006413
Gma19g02494 96 Pfam Domain found in IF2B/IF5 13 95 IPR002735 GO:0003743|GO:0006413
Gma19g02494 96 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 65 95 IPR016190 GO:0003743|GO:0006413
Gma19g02494 96 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 1 17 - -
Gma19g02494 96 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 17 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02494 Gma-Chr19 53303560 53303938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02494 1 94 Eukaryotic Initiation Factors Gene Family AT1G36730 66.142 6.02e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02494 K03262 - gmx:100777906 179.874