Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02493 ATGAGGAGAGCTGAGAAGGAGGGACTGAAGGAAGGTGAAATGGCTGATGAGGAACAGAAGAAAGTGAAGAAAGAGGTTAAGAAGAAAGGCTCTTCATCTTCAAAAGATGGCACTGCTAAATCCACCTCTCCAAAGAAGAAAGCAAGTGGGTCTGATGAAGACCGCACTTCACCTACTCACAGTCAAATTGATGAGGAAGAGGAGGCTCCAGATGAAGATGATGGTGATGATGACGTGCAATGGCTGACAGATACATCACTTGATGCTGCTCGTCAACGTATCCAAGAACAGTTAAGTGCTGTGACAGCTGATATGGTTATGCTTTCTACAGATGAACCAGAGAAGAAGAAAAAAGCAGCAAGTAACGGAAATGGCGGTTCTCAGAATGGTAACTCAATGCACTATAAGACCCTGGTTGGCAAAGTGAAAGCTAATTTGAAGAAAGGTATTGGAGCGAATGAATTGCTGTCCCATCTTTCAGCACATCCTGCACCTGCTCAAGAAAAGATGAGTGCTCTGGTTGAAGCTCTATTCGAGGGAACTGAGAAAGGTTTTGCTAAAGAAGCTGATAAGAAGAAGAACTACTTTGCTGCTGCTGTTGCCGAAGAGGGATCCCAGCTGTTATTGCTTCATGCTATTGAAGAATTTTCTTGCAAGTCTACTTCCAATGCTTTGAAGGAGGTTGCCCTGGTTCTGAAGGCACTCTATGATGCTGATGTGTTGGAGGAAGAGCACATAGTGCTGTGGTATCAAAAGGGACTGAAGGGCGATAACAAGAACTCTAAGACTTTGAAGAATGCTCAACCTTTCATTGATTGGCTTCAGAGTGCAGAATCCGAAACCGAGGAAGAATAA 855 0.4398 MRRAEKEGLKEGEMADEEQKKVKKEVKKKGSSSSKDGTAKSTSPKKKASGSDEDRTSPTHSQIDEEEEAPDEDDGDDDVQWLTDTSLDAARQRIQEQLSAVTADMVMLSTDEPEKKKKAASNGNGGSQNGNSMHYKTLVGKVKANLKKGIGANELLSHLSAHPAPAQEKMSALVEALFEGTEKGFAKEADKKKNYFAAAVAEEGSQLLLLHAIEEFSCKSTSNALKEVALVLKALYDADVLEEEHIVLWYQKGLKGDNKNSKTLKNAQPFIDWLQSAESETEEE 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02493 284 Gene3D - 129 275 - -
Gma19g02493 284 SUPERFAMILY ARM repeat 135 278 IPR016024 -
Gma19g02493 284 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 1 284 - -
Gma19g02493 284 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 284 IPR045196 GO:0003743|GO:0006413
Gma19g02493 284 CDD W2_eIF5 168 282 - -
Gma19g02493 284 SMART 542_3 193 280 IPR003307 GO:0005515
Gma19g02493 284 Pfam eIF4-gamma/eIF5/eIF2-epsilon 206 284 IPR003307 GO:0005515
Gma19g02493 284 ProSiteProfiles W2 domain profile. 128 284 IPR003307 GO:0005515
Gma19g02493 284 MobiDBLite consensus disorder prediction 1 64 - -
Gma19g02493 284 MobiDBLite consensus disorder prediction 1 80 - -
Gma19g02493 284 MobiDBLite consensus disorder prediction 112 132 - -
Gma19g02493 284 MobiDBLite consensus disorder prediction 65 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02493 Gma-Chr19 53302623 53303477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02493 1 277 Eukaryotic Initiation Factors Gene Family AT1G77840 51.408 9.17e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02493 K03262 - gmx:100777906 474.552