Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02477 ATGTGGTGGAGATCAGCATCATTCATCATGGACAGGCAGCAGCAGCAGAACCAGGGGGACTCCTCAAACCCTAATATCTCTGCCTACTATGAGACCAGAGCGGCGCACCACGGCGTGGTCACCAGCGACTGGCTGGCCCAGGCTCAGGCCGCTATTGGCCCCGAACCTCAACCTCAACCTCAACTCAGCCCCGATCCTGACAAGCCCTTCAGTGTCATCGACCAGTTTAACAGCTGGCGGAAACAGCCCCATTTGGCCGAGGCCGTCGCCGCCATTCGCGCCCTGGCCGCCGTCATAAGATCCAGCCAGGCTACCACCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAAGTATTGGTTCAActctctctctccctctctctctctctctctGATGATTTATTCTTCTTCATTCCTTTGCAGTCTTGGGATACCTCCTCTATCTCTTTGACAGCCGGCTGTGATCTCTTTATGCGATATGTCACTCGCACTTCTGCTTTAGAGTATGAAGACTTCAATTCCGCTAAGTCTCGCTTGATCGAACGTGCTGAGAAGTTTGGGGAAATCTCCTACAAGGCCCGCAAAGTTATTGCAATGTTGAGTCAGGATTTTATATTTGATGGCTGTACAATTTTGGTTCATGGTTTTTCCAGAGTCGTCTTTGAAGTCCTGAAACTTGCTGCACAAAATAACAAACTATTTCGGGTCTTCTGCACTGAGGGAAGACCAGACCGAACAGGTTTGCGGTTGTCGAATGAGCTGGCCAAGCTTGATGTTCCTGTGAAACTTCTAATAGATTCTGCTGTTGCATATACTATGGATGAGGTGGACATGGTTTTTGTGGGTGCAGATGGAGTTGTCGAAAGTGGGGGCATAATCAACATGATGGGGACCTATCAAATAGCATTGGTTGCACACAGTATGAATAAACCAGTTTATGTCGCTGCTGAGAGCTACAAGGTACATTTGAATGCATTCATATCCTTTTTTGACAAATTAGGAATTTATGTTCTGTAG 1032 0.4661 MWWRSASFIMDRQQQQNQGDSSNPNISAYYETRAAHHGVVTSDWLAQAQAAIGPEPQPQPQLSPDPDKPFSVIDQFNSWRKQPHLAEAVAAIRALAAVIRSSQATTMMQLEIELKKASDSLKVLVQLSLSLSLSLSDDLFFFIPLQSWDTSSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARKVIAMLSQDFIFDGCTILVHGFSRVVFEVLKLAAQNNKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKVHLNAFISFFDKLGIYVL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02477 343 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 25 140 - -
Gma19g02477 343 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 145 326 - -
Gma19g02477 343 Gene3D - 196 336 IPR042529 -
Gma19g02477 343 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 145 326 - -
Gma19g02477 343 SUPERFAMILY NagB/RpiA/CoA transferase-like 70 330 IPR037171 -
Gma19g02477 343 Gene3D - 69 194 IPR042528 -
Gma19g02477 343 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 25 140 - -
Gma19g02477 343 Coils Coil 107 127 - -
Gma19g02477 343 Pfam Initiation factor 2 subunit family 147 327 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02477 Gma-Chr19 53139760 53142103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02477 1 326 Eukaryotic Initiation Factors Gene Family AT1G72340 71.976 2.32e-162 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02477 K03239 - gmx:100808764 549.666