Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02463 ATGTCACCTATCATTGTCCTCCTCTCTTTTCTTCTTCTTCTTCTGTGCTTCCCTTTTTCTTGTTCCCTCCAACACCATCAATCCCCTTTCCTTCCAAACTCCTGCAATAATGTAACATGCGGGGACCTCCATGTTCCCTTTCCTTTCCATGTCAACACTTCATGTGACTCAATTTCCAGCGCCTTCCATCTCTCGTGCTCAAATTCCTCTGCCCTTTTACTCAGAATTGGCCCAGTGAGCTACACAGTCTTGGAATTCTTCCCAGATGGTGTGCTGGTCGACTTTCCAGGCTCATCATCCTGTAGACAGTACTATGACTTGAACTCTTTTGGCAGAAATTTTGCAGGGAAGGACTACTTTGGCTTGTCGGTTGATAATGTTATTGGGCTCTATGACTGTGAGGATTCTTCTCTGTGCAAAGCAGATTGTGAAACCATTGACTTGCCTGGTTGTGATGGAAAGGGTGGAGGCTCCCTTGCCTGCTGCTATCCACTCTCTGACCATACCATATGGCATGTTGGAGATGGCTTTTCGGTGTTTTCTCAGTTTGGATGCAGAGGGGTTTCTAGTTGGGCTGTTCTGAGAGGCTCCACTTGGGGAAAACGAGGCGTCAAGTTGGAATGGGCACTTCCCAGGAACTCCTCTTCTGAAGTTTGTGCTACGAATGCTAACATTGCCAATTCTACAGCAGTTCAAGGAGGCGTCAGATGTGTCTGCCAAAATGGATATGTTGGTGATGGTTTTGCTAATGGAACTGGATGTTTGCAGGCCTGCATAAAGGATGGAAAGGAAGCATATGGAAGTGACTGCTACATCAAAAGGCATGATCAGAGGAAATTTGTTATGATCGCCGGAATCATTGGCCCAGTTCTCATTGTTGCTTCCCTGGTTGCACTATTTTATCTTCTTAAAAGGCCAACAAAACCAGGGATGTTTTACACAGAGCAGGCTTACTATCAAAACATTACAATCCCCAAAGCTTGTAAAACTCGATTATTCAGCTTCCATGAGCTAGAGGAAGCCACTAAAGGTTTTGAAGAGGGTCAGAAACTAATGCATGACAATAATGGGACAATTTTCGCTGGAGTTTTAGGGGATGAATCTCACATAGCTGTCCACAAGTTACAGTGCCAGAAGAATGACTTGATACAAGTCCTGTCACAAATCGAGGTTCTATCTTCTATTGTGCATAGAAACATGGCTCGCATTCTTGGATGCTGTATTGAATCTGGCAACACTCTAGTAGTTTATGAGTATCCTTCCAATGGTACCTTGGAGGAACATTTACATCAAAGCAAAGGACAACAACTTCGTTTAGATTGGTATAGGAGATTGACTATTGCTGCAGAAACAGCTAGTGTTCTTGCATTCTTACACTACGAGAACAATCCTCCCATACTTCACCATAACCTTAAATCTGCCTGCATCTTCCTAGATGATGACTATTCTGTCAAGATTGCAGGATTTGGTCTGATCAACTCCAATTTTTACTATGGTTCTCACTTACACAAGAACTATGAAGCATTTGACATCTGCAAAAATGATGTTTACGATATGGGTGTGTTGCTTCTTGAGATTATCTCAGGCTCAAATCAGTTGGATTCACCAACTTTGGCTTTACAGCATGTAAGGGCTGGAAAATTTGAAGAAATTTTGGACCCATTTCTTTGCTATGATGAGCAACCACATTACCGCCAAGAGCAAATGCAAATAATTGCAGATCTAGCTACAAGGTGCCTGTTATTTGGGGTAGATGGAAGGCTAGGAATGATAGATGTTGTGAGGGAGTTAGTACACATGACTAAAGAAAGTCTTGATGGAGGAATTATGAAAGGACCTGCACTGGAGGAGACATTCTCAAATTCAAGCCTTCTTCAGATGATATCAATGTCTCCTGATTCTATGAGTGTCCCTTGA 1917 0.4288 MSPIIVLLSFLLLLLCFPFSCSLQHHQSPFLPNSCNNVTCGDLHVPFPFHVNTSCDSISSAFHLSCSNSSALLLRIGPVSYTVLEFFPDGVLVDFPGSSSCRQYYDLNSFGRNFAGKDYFGLSVDNVIGLYDCEDSSLCKADCETIDLPGCDGKGGGSLACCYPLSDHTIWHVGDGFSVFSQFGCRGVSSWAVLRGSTWGKRGVKLEWALPRNSSSEVCATNANIANSTAVQGGVRCVCQNGYVGDGFANGTGCLQACIKDGKEAYGSDCYIKRHDQRKFVMIAGIIGPVLIVASLVALFYLLKRPTKPGMFYTEQAYYQNITIPKACKTRLFSFHELEEATKGFEEGQKLMHDNNGTIFAGVLGDESHIAVHKLQCQKNDLIQVLSQIEVLSSIVHRNMARILGCCIESGNTLVVYEYPSNGTLEEHLHQSKGQQLRLDWYRRLTIAAETASVLAFLHYENNPPILHHNLKSACIFLDDDYSVKIAGFGLINSNFYYGSHLHKNYEAFDICKNDVYDMGVLLLEIISGSNQLDSPTLALQHVRAGKFEEILDPFLCYDEQPHYRQEQMQIIADLATRCLLFGVDGRLGMIDVVRELVHMTKESLDGGIMKGPALEETFSNSSLLQMISMSPDSMSVP 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02463 638 Gene3D Phosphorylase Kinase; domain 1 312 419 - -
Gma19g02463 638 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 45 633 IPR045274 GO:0007166
Gma19g02463 638 ProSiteProfiles Protein kinase domain profile. 345 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g02463 638 Gene3D Transferase(Phosphotransferase) domain 1 421 607 - -
Gma19g02463 638 Pfam Wall-associated receptor kinase galacturonan-binding 35 86 IPR025287 GO:0030247
Gma19g02463 638 SUPERFAMILY Protein kinase-like (PK-like) 328 597 IPR011009 -
Gma19g02463 638 Pfam Protein tyrosine and serine/threonine kinase 348 528 IPR001245 GO:0004672|GO:0006468
Gma19g02463 638 PANTHER OS10G0351500 PROTEIN 45 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02463 Gma-Chr19 53020522 53023158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02463 37 597 Receptor kinase-like Gene Family AT2G23450 29.868 1.29e-61 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma19g02463 PK_Tyr_Ser-Thr 6.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02463 - - gmx:100810557 1300.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02463 19 53020522 53023158 Gma19g02463 19 53020522 53023158 ECH