Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02462 ATGGACGCCGACTCCTCTGGAGAAGAAGTGCTTATTAAAACAAGAAAGCCATATACTATCACAAAGCAAAGAGAACGATGGACAGAGGAGGAACATAACAGATTTCTAGAAGCCTTGAAGCTATACGGGCGAGCATGGCAGCGCATAGAAGAGCATATAGGAACAAAGACTGCTGTGCAAATCAGGAGTCATGCTCAGAAATTCTTTACAAAGTTGGAGAAAGAGGCCTTTGTAAAGGGTGTTCCAATAGGACAAGCTCTTGATATAGACATCCCCCCTCCACGGCCAAAAAGAAAACCAAACAATCCTTATCCCCGGAAGACCAATGTTGGTGGTGCCCCAACATTACATAGCGGAGCAAGGCATGGAAAGCCTCTCATTTCAATTGTATCTTCACTTGGTAAACAAGCATTGGGCTTGGAGAAAGAACCCCTTCCAGAGAAGCATGATGTCGACCTAAGGCCATCAACCGTAAAAGAAAATAAGGACCAAAGCTGCTCAAAAGTATTTACCATTCTCCAAGAGGCACCCTGTTCATCTGTATCTTCCGCCAACAAGAATTCAACATCAATATTAGTGCCGCTGAGAAATTCATGTGCCCTAAGGAAGTTTATACCTTCGGTGAAAGATGTGATAACTCAAGATGAAACCAACGACTCTTTTGTTACTGATGATCTTGAAAATCAGAAGTTGGAGATAGATGATGGCAAGCACACTCAAAAGTCTAATGGCACTTGTAAAGTCTCTAAGTCGGAGAATTCTGGTGCTTCAGAATTGGTTCAAACTGAGAAAACAGATGGTCTTAATTGTGCATTAACAATTGAAGGGGTGCAAGGCAATCAGAATTACCCAAGACATGTCCCTGTGCACGTTGTTGATGGGAACCTTGGAACTAGTACTCAAAATCCATCCCCAGATATGGTGTTTCAAGACTCCATATTTCAGCCGAAAGGAGGGGTTAATGGGCAACCTAACCTTGTCACCATTTCTGCTACATCAAACATAAGTGAAAGTCAAAACAACACTGCACGGTCCTCTATTCATCAATCATTTCCTCCTTGTCCTACCTTCACACAGGATGATTATCATTCATTTCTTCAGGTGTCCTCCACATTTTCAAGTCTTATTGTCTCTACCTTGCTACAAAACCCTGCAGCCCATGCTGCAGCAAGTTTTGCTGCTACATTTTGGCCCTATGCAAATGCAGAAACTTCCGCAGATTCTCCCATGTGCACTCCAGATTTTCCATCAAGACAAATTGGCTCGCCTCCAAGTGTGACAGCTATTGCAGCTGCTACAGTAGCTGCCGCAACCGCATGGTGGGCTGCCCATGGACTGCTTCCTTTGTGTGCTCCGCTCCATACAGCTTTTGCCTGTCCTCCTGCATCAGCGATTGCAGTTCCATTAATGAATATTGATGAATCACCACAAAAAACAGAACAAGAAGAGATTAAACCACAAAATTCTTCTCTGCAAGATCAGATACTGGATCCAGAACACTCAGAAGCTCAACATTCAGCTCCTAAGTCCCCAGCTGTTTTTTCATCCAAATCTGAGGAGAGGGGAGATGCCAATTTAAATACTTCACCAAAGGCTACTAATCATGAGACGAATCAGGTCATTTCTGAGAACCCCGATTCCAACAAAATGAAGGGCAGAAAACCTGTAGACCGTTCCTCATGTGGTTCCAACACAACCTCTAGCAGTGAAGAGACCGAGTTACTACTGAAGGATGAGAAAGAAAAGGAAGAGCCCAAAACACCTGATGCAAACATTTTAGATACCGAGCTTAGTAATCGTCGTAGTAGAAGCATTAACAACCTTACTGATTCTTGGAAGGAGGTCTCTGAAGAGGGGCGTCTTGCCTTTCAGGCTCTATTCTCCAGAGAGGTGTTGCCACAAAGCTTTTCACCTACTCATGATTTGATAAATGAGGATAATCAGATAGACAGCATCAAGGATAACGACCAAAACACAGACTACAAAGATGAAGACCTTGAAAGCAAGAAATGCAGTTCTAATAGTGATGGGGTGCAGAAAAATCTGCTATTTGTCAAAGATAACAATGAGGAGGAGGGACTGCTAATCATAGGTCTTGGACCAGGAAAGCTAAAGACTCGTCCAACAGGGTTTAAACCTTACAAAAGATGTTCGGTAGAGGCCAATGAAAACAGGATCGGAACAGCCTGCAACCAAGGTGAAGAAAAAGGTCCTAAGAGAATACGCTTGAATGGGGAGGCTTCAACTTGA 2250 0.4342 MDADSSGEEVLIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAFVKGVPIGQALDIDIPPPRPKRKPNNPYPRKTNVGGAPTLHSGARHGKPLISIVSSLGKQALGLEKEPLPEKHDVDLRPSTVKENKDQSCSKVFTILQEAPCSSVSSANKNSTSILVPLRNSCALRKFIPSVKDVITQDETNDSFVTDDLENQKLEIDDGKHTQKSNGTCKVSKSENSGASELVQTEKTDGLNCALTIEGVQGNQNYPRHVPVHVVDGNLGTSTQNPSPDMVFQDSIFQPKGGVNGQPNLVTISATSNISESQNNTARSSIHQSFPPCPTFTQDDYHSFLQVSSTFSSLIVSTLLQNPAAHAAASFAATFWPYANAETSADSPMCTPDFPSRQIGSPPSVTAIAAATVAAATAWWAAHGLLPLCAPLHTAFACPPASAIAVPLMNIDESPQKTEQEEIKPQNSSLQDQILDPEHSEAQHSAPKSPAVFSSKSEERGDANLNTSPKATNHETNQVISENPDSNKMKGRKPVDRSSCGSNTTSSSEETELLLKDEKEKEEPKTPDANILDTELSNRRSRSINNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPTHDLINEDNQIDSIKDNDQNTDYKDEDLESKKCSSNSDGVQKNLLFVKDNNEEEGLLIIGLGPGKLKTRPTGFKPYKRCSVEANENRIGTACNQGEEKGPKRIRLNGEAST 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02462 749 MobiDBLite consensus disorder prediction 646 671 - -
Gma19g02462 749 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Gma19g02462 749 MobiDBLite consensus disorder prediction 638 673 - -
Gma19g02462 749 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Gma19g02462 749 MobiDBLite consensus disorder prediction 498 598 - -
Gma19g02462 749 PANTHER PROTEIN LHY 2 731 - -
Gma19g02462 749 SMART sant 23 71 IPR001005 -
Gma19g02462 749 MobiDBLite consensus disorder prediction 572 590 - -
Gma19g02462 749 MobiDBLite consensus disorder prediction 87 121 - -
Gma19g02462 749 MobiDBLite consensus disorder prediction 730 749 - -
Gma19g02462 749 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Gma19g02462 749 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Gma19g02462 749 Gene3D - 26 73 - -
Gma19g02462 749 MobiDBLite consensus disorder prediction 520 546 - -
Gma19g02462 749 MobiDBLite consensus disorder prediction 236 257 - -
Gma19g02462 749 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Gma19g02462 749 MobiDBLite consensus disorder prediction 242 257 - -
Gma19g02462 749 CDD SANT 26 69 IPR001005 -
Gma19g02462 749 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Gma19g02462 749 PANTHER SWI/SNF COMPLEX-RELATED 2 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02462 Gma-Chr19 53001724 53013864 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma19g02462 Myb_DNA-binding 2.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02462 K12133 - gmx:780540 1397.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02462 19 53001724 53013864 Gma19g02462 19 53001724 53013864 ECH