Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02458 ATGGCCAACCTTCCAAATTCAAAGCTTTATGGGAAAGAGAAGATGAAAGGAGAGCAAGAATTAGAAGATGAAGAAAGCTTCTCGCGTGCTATGCTGCTTTGCAGCTCCGTTGTGGTTTCCATGGCGCTGCAATCGGCAACGGAGCTGGGCGTATTTGACGTGTTGCAAGAAGCGGGGGCTAAGCTCTCTGCGAAAGAGATAGCATCCAAGCTTTCCTGCGACAACAACCCTGAAGCAGACTCAATGCTGGATCGCCTTCTAGCCCTTCTAGCCTCTCACTCCATTCTTAACTGTTCTCTCATTCTCGACCACCAAAACCTGGGGACCTTTCAGAGGCTCTACACCATCACTCCCGTCGCCAGATTCTTTGCTCGCAATTCTGATGGGGTTTCCTTGGGACCCTTGATGGCCTTGCTTCAAGACAAGATCTTCCTACATAGCTGGTCGGAGCtgaaagattcaattcgggaagggggtattccattcaacagggtttatggcactcatgcttttgagtatccaaggttggacgcaaggttcaatcaagtttttaacacagcaatgatcaatcacaccactatagtgatgaagaaggttctggagtgctacaaaggttttgagaacataaaaatgcttgtggatgttggtggtggtcttgggatcaacatcaacttgatcacttccaaataccctcatatccagggtatcaattttgacttgcctcatgtcctagaacatgctccttcctatcctggagtggaacacgttggcggagatatgtttgaaaatgtgcctaaaggagacgccatctttatgaagtggatacttcatgattggagtgatgaatactgtctgaagttgttgaagaactgctatgacgcaattcctgatgatggaaaggtgatagttgtggaggcagttcttccaattataccagagacgtcaaatgctgcttggaaggccgtttcccaaacggatgttctgatgatgactcaaaacccgggaggcaaagagcgatctgatcaagaattcatggatttggcAACTGCAGCTGGATTTAGTGGCATCAGATATGAATGCTATGTTCGAACCTTTTGGATCATGGAGTTCTTCAAGTAA 1119 0.2297 MANLPNSKLYGKEKMKGEQELEDEESFSRAMLLCSSVVVSMALQSATELGVFDVLQEAGAKLSAKEIASKLSCDNNPEADSMLDRLLALLASHSILNCSLILDHQNLGTFQRLYTITPVARFFARNSDGVSLGPLMALLQDKIFLHSWSELKDSIREGGIPFNRVYGTHAFEYPRLDARFNQVFNTAMINHTTIVMKKVLECYKGFENIKMLVDVGGGLGININLITSKYPHIQGINFDLPHVLEHAPSYPGVEHVGGDMFENVPKGDAIFMKWILHDWSDEYCLKLLKNCYDAIPDDGKVIVVEAVLPIIPETSNAAWKAVSQTDVLMMTQNPGGKERSDQEFMDLATAAGFSGIRYECYVRTFWIMEFFK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02458 372 Gene3D - 10 123 IPR036388 -
Gma19g02458 372 PANTHER O-METHYLTRANSFERASE 10 372 IPR016461 GO:0008168
Gma19g02458 372 PIRSF O-mtase 8 372 IPR016461 GO:0008168
Gma19g02458 372 Pfam Dimerisation domain 41 91 IPR012967 GO:0046983
Gma19g02458 372 SUPERFAMILY "Winged helix" DNA-binding domain 22 128 IPR036390 -
Gma19g02458 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 372 IPR016461 GO:0008168
Gma19g02458 372 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 10 372 - -
Gma19g02458 372 Pfam O-methyltransferase domain 148 354 IPR001077 GO:0008171
Gma19g02458 372 Gene3D Vaccinia Virus protein VP39 124 372 IPR029063 -
Gma19g02458 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 370 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02458 Gma-Chr19 52990150 52992854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02458 20 372 Monolignol Biosynthesis Gene Families AT5G54160 52.676 1.54e-136 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02458 K13066 - gmx:100803633 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02458 19 52990150 52992854 Gma19g02458 19 52990150 52992854 ECH