Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02456 ATGTCAAAGGACAAAGTTTCCGGTGATCCAAGACGTGCAGTGTGCACAGGTATCACCATCTTCCTCCTCTTAGCCGGCGTCACTCTCCTCGTCCTCTGGCTGGTCTACCGTCCCCACAAGCCGCGCTTCACGGTCATCGGCGCCGCCATCTACGGCCTCAACACCAGCACGCCGCCGCTCATGTCAACCACCATGCAGTTCTCCGTCCTCATAAAGAACCCGAACAGGCGTGTCTCCATTTACTACGACAGGTTCTCCGCCTTTGTCTCGTACAGGAACCAGGCCATAACGCCGCAGGTTCTGCTGCCACCCCTGTACCAGGAGAAGCGCAGCTCGGTTTCGGTGTCCCCGGTGATCGGAGGCACGCCGCTCCCGGTGTCGGTGGAGGTTTCGAACGGGTTGGCGATGGACGAGGCTTATGGGGTGGTGGGTCTGAGGCTGATATTTCAGGGCAGAGTGCGGTGGAAGGCTGGGGCCATCAAAACTGCGCACTATGGGCTCTACGTTAAGTGCGATGTTTTGATGGGTTTGAAGAAAGGGTTGGAATCAGAATGGCAAAAGGTCTTCTTCTCTTACTTGGAATTATTTGGGTTGGTTCAGCAAAGGCACTGGGGTGGGGAGTCCATGTTTGTGAGTTTGAACGCAGGGCACTTGGAGCAGCAAAGTAAGGCATCGTCCAGAAAGTGCTATGCTTTTCTAAAGCCAAAGTTGAAAGTTATTGTTGCCTTGCAAGAGCTTAGGCTAACTATTTTGCATCTCAATATCACATCTTCGGAGGCTACGGCTCTCTACTCTTTCAATCTCAAGATTGAAGAAGACAGTAAATTGGTGTCAGCAAGTGAAATAACAGAAGCGGTTGATCATATATTTGGATCCATTAATGATAGCTAA 891 0.5163 MSKDKVSGDPRRAVCTGITIFLLLAGVTLLVLWLVYRPHKPRFTVIGAAIYGLNTSTPPLMSTTMQFSVLIKNPNRRVSIYYDRFSAFVSYRNQAITPQVLLPPLYQEKRSSVSVSPVIGGTPLPVSVEVSNGLAMDEAYGVVGLRLIFQGRVRWKAGAIKTAHYGLYVKCDVLMGLKKGLESEWQKVFFSYLELFGLVQQRHWGGESMFVSLNAGHLEQQSKASSRKCYAFLKPKLKVIVALQELRLTILHLNITSSEATALYSFNLKIEEDSKLVSASEITEAVDHIFGSINDS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02456 296 Pfam Late embryogenesis abundant protein 69 169 IPR004864 -
Gma19g02456 296 PANTHER OS05G0367900 PROTEIN 9 181 IPR044839 GO:0098542
Gma19g02456 296 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 9 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02456 Gma-Chr19 52977607 52982338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02456 228 294 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 50.746 4.12e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02456 - - gmx:100804161 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02456 19 52977607 52982338 Gma19g02456 19 52977607 52982338 ECH
Gma19g02456 19 52977607 52982338 Gma16g00157 16 1615389 1616141 ECH