Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma19g02452 | ATGGCATTGGCAGCTAATGCTACTCCCTCTCTGGCCTTCGCTTCTTCCTCCTTACTGAACCACAATCCCCAATTTGGTGCTGCTCCCAAACGATTCGTTTCTTCTTCTTCTTCTTCTTTGTGCCTTGCCGCGGGGCTCAGCTCCAAGGCTAGGGCCTTCAGTTTCTCTGCCTCGGCTGCGGCCCTTGACGGAGAAGAACTCGCGGTGGAAGAAACGTGGAAGCTAGCGAGACCAACCGAAGTGTACGTCTGCAACCTTCCACGAAGCTGTGACACGGAGCAACTACTTCATATGTTCAACCCTCACGGAACCGTTCTCTCTGCCCAGGTTTGCCGGAGTGCGGAAACTGGTGAAAGTAGAGGGAGTGCTTATGTCACAATGGCTTCTATTAACTCGGCAAGAAAAGCAATTGCGGCATTGGATGCATCGGATTTTGGTGGGCGTGAAGTGCGGGTTAGATTTTCAGCTGAGATGAATCCCAAGAGAAGGAATCTTGAAACAATGAACTCATCACCCAAGAGAGTTATATACTATGAAGGTCCTCATAAGTTGTATGTTGGCAATCTTTCCAGGAGTGCGGGGCCTCAAGACTTGAAACAACTTTTTGGTAGATTTGGTATTGTAGCTAGTGTAAGGGTGTTGCAAGATTTGAGGAAAGGGAATCGCAGGGTCTATGCGTTTGTCTCTTATCATTCAGAGTCAGAACGTGATGCAGCAATGTCGCTCAATGGAACAGAATTTTTTGGTCGTGTGCTAGTGATTAGAGAGGGTGTAGAGAGAGAGGACTGA | 789 | 0.4842 | MALAANATPSLAFASSSLLNHNPQFGAAPKRFVSSSSSSLCLAAGLSSKARAFSFSASAAALDGEELAVEETWKLARPTEVYVCNLPRSCDTEQLLHMFNPHGTVLSAQVCRSAETGESRGSAYVTMASINSARKAIAALDASDFGGREVRVRFSAEMNPKRRNLETMNSSPKRVIYYEGPHKLYVGNLSRSAGPQDLKQLFGRFGIVASVRVLQDLRKGNRRVYAFVSYHSESERDAAMSLNGTEFFGRVLVIREGVERED | 262 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma19g02452 | 262 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 182 | 259 | IPR000504 | GO:0003723 | |
Gma19g02452 | 262 | SUPERFAMILY | RNA-binding domain, RBD | 78 | 169 | IPR035979 | GO:0003676 | |
Gma19g02452 | 262 | SMART | rrm1_1 | 183 | 255 | IPR000504 | GO:0003723 | |
Gma19g02452 | 262 | SMART | rrm1_1 | 80 | 153 | IPR000504 | GO:0003723 | |
Gma19g02452 | 262 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 184 | 252 | IPR000504 | GO:0003723 | |
Gma19g02452 | 262 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 81 | 151 | IPR000504 | GO:0003723 | |
Gma19g02452 | 262 | Gene3D | - | 170 | 262 | IPR012677 | - | |
Gma19g02452 | 262 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 79 | 157 | IPR000504 | GO:0003723 | |
Gma19g02452 | 262 | Gene3D | - | 56 | 169 | IPR012677 | - | |
Gma19g02452 | 262 | SUPERFAMILY | RNA-binding domain, RBD | 180 | 260 | IPR035979 | GO:0003676 | |
Gma19g02452 | 262 | PANTHER | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN | 68 | 262 | - | - | |
Gma19g02452 | 262 | PANTHER | OS02G0815200 PROTEIN | 68 | 262 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma19g02452 | Gma-Chr19 | 52963230 | 52964791 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma19g02452 | 70 | 262 | Eukaryotic Initiation Factors Gene Family | AT1G22760 | 27.411 | 2.57e-15 | 73.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma19g02452 | - | - | gsj:114400287 | 479.944 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma19g02452 | 19 | 52963230 | 52964791 | Gma19g02452 | 19 | 52963230 | 52964791 | ECH |