Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02448 ATGCCGGAGATGGAGATGAGCATATGTGTGAATGGAGAATCCCAAGTCCCTCCAGGCTTCCGGTTTCATCCAACCGAAGAGGAACTGTTGCAGTACTATTTGAGGAAGAAGATGTCCAACGAGAAGATCGACCTCGACGTGATTCGCGATGTTGATCTCAACAGGCTCGAACCATGGGACATACAAGAGATGTGCAAAATAGGAAGCAGCCCACAAAACGATTGGTACTTGTTCAGCCACAAGTACAAGAAGTACCCCACGGGAAGCCGCACAAACCGCGCCACCAGTGTTGGGTTCTGGAAGGCCACGGGGCGCGACAAGGTCATATATAGCAACGGGAAGATAATTGGAATGAGAAAAACATTGGTTTTCTACAAAGGGCGTGCCCCCAATGGCCAAAAGTCTGATTGGATCATGCATGAATACAGGCTAGACGACATTAATAACACCAATGAGATGGAACACGGGTGGGTGGTCTGTAGAGTTTTCAAGAAGAAGAACGTCCCTCTCAAAACACTAGATAGCCCAAAATCCATGACCATGAATATGGTCACAGAAAGCGACTACTGTGGTGGCTTCACTAGCTGGGAATCCCTTGATCAGCTTGTGGCATCACAACTGAATGGACAAACTGAGACATATTGCAGTGATTTGCAATTCCCCGCATTTCTATCATCCTCATACATTGCTACAACAACAACAACAACAACACACATTGCTCCCACAATACAGGATTACCCCAGCTACGACATTGACCTGTGGAACCACTGTGCTTCGTGTCCAACACTCCAAATTTTTCTCAAGTTGAAACTATTAACAAACAAACGGCACAAGCCTTCTCAAGTTGAATCAACAGACTCCGTTTTTGGGCCCATGCACCCGGTGGTGTCCTTCTTTGCCCAAGCCCTCGCTCGTCGAATCTACCCATTAGAAACCCTTGAATCCACTCAAAGGGTGGTGCGAATCCAGATGCACTCTGGTGTAAATCCACGATGCGACGGCGATGTTACGACACGACCTACTGTGAGGTTGCGGATTTGA 1041 0.4755 MPEMEMSICVNGESQVPPGFRFHPTEEELLQYYLRKKMSNEKIDLDVIRDVDLNRLEPWDIQEMCKIGSSPQNDWYLFSHKYKKYPTGSRTNRATSVGFWKATGRDKVIYSNGKIIGMRKTLVFYKGRAPNGQKSDWIMHEYRLDDINNTNEMEHGWVVCRVFKKKNVPLKTLDSPKSMTMNMVTESDYCGGFTSWESLDQLVASQLNGQTETYCSDLQFPAFLSSSYIATTTTTTTHIAPTIQDYPSYDIDLWNHCASCPTLQIFLKLKLLTNKRHKPSQVESTDSVFGPMHPVVSFFAQALARRIYPLETLESTQRVVRIQMHSGVNPRCDGDVTTRPTVRLRI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02448 346 Gene3D NAC domain 25 169 IPR036093 GO:0003677|GO:0006355
Gma19g02448 346 ProSiteProfiles NAC domain profile. 16 165 IPR003441 GO:0003677|GO:0006355
Gma19g02448 346 Pfam No apical meristem (NAM) protein 17 144 IPR003441 GO:0003677|GO:0006355
Gma19g02448 346 SUPERFAMILY NAC domain 6 165 IPR036093 GO:0003677|GO:0006355
Gma19g02448 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 6 185 - -
Gma19g02448 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02448 Gma-Chr19 52931509 52934763 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02448 1 176 NAC Transcription Factor Family AT2G46770 73.298 1.34e-98 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma19g02448 NAM 1.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02448 - - gmx:100808411 552.362