Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02446 ATGCCGGAGATGAAGATGAGCATATGTGTGAATGGAGAATCCCAAGTCCCTCCAGGCTTCCGGTTTCATCCAACCGAAGAGGAACTGTTGCAGTACTATTTGAGGAAGAAGGTGTCCAACGAGAAGATCGACCTCGACGTGATTCGCGATGTTGATCTCAACAGACTCGAACCATGGGACATACAAGAGATGTGCAAAATAGGAAGCAGCCCACAAAACGATTGGTACTTGTTCAGCCACAAGGACAAGAAGTACCCCACGGGAAGCCGCACCAACCGCGCCATCATTGTTGGGTTCTGGAAGGCCACGGGGCGCGACAAGGTCATATATAGCAACGGGAAGATAATTGGAATGAGAAAAACATTGGTTTTCTACAAAGGGCGTGCCCCCAATGGCCAAAAGTCTGATTGGATCATGCATGAATACAGGCTAGACGACATTAATAACACCAATGAGATGGAACACGGGTGGGTGGTCTGTAGAGTTTTCAAGAAGAAGAATGTCCCTCTCAAAACCCTAGATAGCCCAAAATCCATGACCATGAATATGTTTACAGAAAGCGACTACTGTGGAGGCTTCACTAACTGGGAATCCCTTGATCAGCTTGTGGCATCACAACTGAATGGACAAACTGAGACATATTGCAGTGATTTGCAATTCCCCGCATTTCTATCATCCTCATACATTGCTACAACAACACACATTGCTCCCACAATACAGGATTACCCCAGCTACGACATTGACCTGTGGAACCACTGTGCTTCGCGCGTGTCCAACACTCCAAATGTAACACTCTAA 798 0.4687 MPEMKMSICVNGESQVPPGFRFHPTEEELLQYYLRKKVSNEKIDLDVIRDVDLNRLEPWDIQEMCKIGSSPQNDWYLFSHKDKKYPTGSRTNRAIIVGFWKATGRDKVIYSNGKIIGMRKTLVFYKGRAPNGQKSDWIMHEYRLDDINNTNEMEHGWVVCRVFKKKNVPLKTLDSPKSMTMNMFTESDYCGGFTNWESLDQLVASQLNGQTETYCSDLQFPAFLSSSYIATTTHIAPTIQDYPSYDIDLWNHCASRVSNTPNVTL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02446 265 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 5 183 - -
Gma19g02446 265 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 183 - -
Gma19g02446 265 SUPERFAMILY NAC domain 5 165 IPR036093 GO:0003677|GO:0006355
Gma19g02446 265 Pfam No apical meristem (NAM) protein 17 144 IPR003441 GO:0003677|GO:0006355
Gma19g02446 265 Gene3D NAC domain 25 169 IPR036093 GO:0003677|GO:0006355
Gma19g02446 265 ProSiteProfiles NAC domain profile. 16 165 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02446 Gma-Chr19 52919846 52920713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02446 1 203 NAC Transcription Factor Family AT2G46770 66.516 1.58e-100 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma19g02446 NAM 1.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02446 - - gmx:100807338 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02446 19 52919846 52920713 Gma19g02446 19 52919846 52920713 ECH