Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02439 ATGTTGGGCTTAAATTTCAAACAAGTTCCGCAGACATACGATGAAGGTCAGCACGAGGGAAGGCAAGCGGTGAGCAAAGAAGACATACAGATACGAAAAGGTTGCTTGAAAATCAAGGTGGGTCAAGGCGAAGAGCAGCAGAAAGTAACGGTGCCCGTGAATTACCTGAAGCACCCTCTCTTTGTTCAGCTTCTGAAGGAGGCAGAGGAAGAGTATGGTTTTTCACAGAAAGGAACCATAACTATCCCTTGCCAAGTGGCGGAATTTAAGAACGTTCAACACTTGATTCATACAGAGAGGTCCCTCCACCACCACCATCACCTCGTTGCCACCTGCTTCAAGGCTTGA 348 0.4741 MLGLNFKQVPQTYDEGQHEGRQAVSKEDIQIRKGCLKIKVGQGEEQQKVTVPVNYLKHPLFVQLLKEAEEEYGFSQKGTITIPCQVAEFKNVQHLIHTERSLHHHHHLVATCFKA 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02439 115 Pfam Auxin responsive protein 25 95 IPR003676 GO:0009733
Gma19g02439 115 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 17 108 - -
Gma19g02439 115 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02439 Gma-Chr19 52863126 52864043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02439 31 101 Calmodulin-binding Proteins AT4G31320 42.254 7.95e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02439 K14488 - gmx:100500512 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02439 19 52863126 52864043 Gma19g02439 19 52863126 52864043 ECH
Gma19g02439 19 52863126 52864043 Gma16g00186 16 1932849 1933464 ECH
Gma19g02439 19 52863126 52864043 Gma07g00488 07 4558269 4559187 PCT
Gma19g02439 19 52863126 52864043 Gma16g00186 16 1932849 1933464 PCT
Gma07g00488 07 4558269 4559187 Gma19g02439 19 52863126 52864043 PCT
Gma16g00186 16 1932849 1933464 Gma19g02439 19 52863126 52864043 PCT