Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02436 ATGACAAGCCACATTGACGACAACCTCTGGATAATAGCCCTGACCTCGAAATGCACCCAAGAAAACCTTGCATGGGTCCTTTTGATCATGGGCTCACTCTGGTTAACCATGACTTTCTATTACTGGTCACACCCCGGTGGTCCTGCCTGGGGCAAGTACTACACCTACTCTCCCCCCCTTTCAATCATTCCCGGTCCCAAAGGCTTCCCTCTTATTGGAAGCATGGGCCTCATGATTTCCCTGGCCCATCACCGTATCGCAGCCGCGGCCGCCACATGCAGAGCCAAGCGCCTCATGGCCTTTAGTCTCGGCGACACACGTGTCATCGTCACGTGCCACCCCGACGTGGCCAAGGAGATTCTCAACAGCTCCGTCTTCGCCGATCGTCCCGTCAAAGAATCCGCATACAGCCTCATGTTTAACCGCGCCATCGGCTTCGCCTCTTACGGAGTTTACTGGCGAAGCCTCAGGAGAATCGCCTCTAATCACTTCTTCTGCCCCCGCCAGATAAAAGCCTCTGAGCTCCAACGCTCTCAAATCGCCGCCCAAATGGTTCACATCCTAAATAACAAGCGCCACCGCAGCTTACGTGTTCGCCAAGTGCTGAAAAAGGCTTCGCTCAGTAACATGATGTGCTCCGTGTTTGGACAAGAGTATAAGCTGCACGACCCAAACAGCGGAATGGAAGACCTTGGAATATTAGTGGACCAAGGTTATGACCTGTTGGGCCTGTTTAATTGGGCCGACCACCTTCCTTTTCTTGCACATTTCGACGCCCAAAATATCCGGTTCAGGTGCTCCAACCTCGTCCCCATGGTGAACCGTTTCGTCGGCACAATCATCGCTGAACACCGAGCTAGTAAAACCGAAACCAATCGTGATTTTGTTGACGTCTTGCTCTCTCTCCCGGAACCTGATCAATTATCAGACTCCGACATGATCGCTGTACTTTGGGAAATGATATTCAGAGGAACGGACACGGTAGCGGTTTTGATAGAGTGGATACTCGCGAGGATGGCGCTTCATCCTCATGTGCAGTCCAAAGTTCAAGAGGAGCTAGATGCAGTTGTCGGAAAAGCACGCGCCGTCGCAGAGGATGACGTGGCAGTGATGACGTACCTACCAGCGGTGGTGAAGGAGGTGCTGCGGCTGCACCCGCCGGGCCCACTTCTATCATGGGCCCGCTTGTCCATCAATGATACGACCATTGATGGGTATCACGTACCTGCGGGGACCACTGCTATGGTCAACATGTGGGCTATTTGCAGGGACCCACACGTGTGGAAGGACCCACTCGAATTTATGCCCGAGAGGTTTGTCACTGCGGGTGGAGATGCCGAATTTTCGATACTCGGGTCGGATCCAAGACTTGCTCCATTTGGGTCGGGTAGGAGAGCGTGCCCAGGGAAGACTCTTGGATGGGCTACGGTGAACTTTTGGGTGGCGTCGCTCTTGCATGAGTTCGAATGGGTACCGTCTGATGAGAAGGGTGTTGATCTGACGGAGGTGCTGAAGCTCTCTAGTGAAATGGCTAACCCTCTCACCGTCAAAGTGCGCCCCAGGCGTGGATAA 1572 0.5363 MTSHIDDNLWIIALTSKCTQENLAWVLLIMGSLWLTMTFYYWSHPGGPAWGKYYTYSPPLSIIPGPKGFPLIGSMGLMISLAHHRIAAAAATCRAKRLMAFSLGDTRVIVTCHPDVAKEILNSSVFADRPVKESAYSLMFNRAIGFASYGVYWRSLRRIASNHFFCPRQIKASELQRSQIAAQMVHILNNKRHRSLRVRQVLKKASLSNMMCSVFGQEYKLHDPNSGMEDLGILVDQGYDLLGLFNWADHLPFLAHFDAQNIRFRCSNLVPMVNRFVGTIIAEHRASKTETNRDFVDVLLSLPEPDQLSDSDMIAVLWEMIFRGTDTVAVLIEWILARMALHPHVQSKVQEELDAVVGKARAVAEDDVAVMTYLPAVVKEVLRLHPPGPLLSWARLSINDTTIDGYHVPAGTTAMVNMWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEWVPSDEKGVDLTEVLKLSSEMANPLTVKVRPRRG 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02436 523 Pfam Cytochrome P450 64 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g02436 523 SUPERFAMILY Cytochrome P450 63 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g02436 523 PANTHER CYTOCHROME P450 78A7-RELATED 1 522 - -
Gma19g02436 523 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g02436 523 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g02436 523 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g02436 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Gma19g02436 523 Gene3D Cytochrome P450 59 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g02436 523 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g02436 523 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g02436 523 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g02436 523 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g02436 523 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g02436 523 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g02436 523 PANTHER CYTOCHROME P450 78A6 1 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02436 Gma-Chr19 52832414 52834424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02436 1 522 Cytochrome P450 AT2G46660 65.356 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02436 K20619 - gmx:100799906 1045.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02436 19 52832414 52834424 Gma19g02436 19 52832414 52834424 ECH