Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02416 ATGGAAACGGAAACCCGACGGAAAGTGGAGGAGATGGTGTTGGATATATTGAAGAAATCCAACATTGAAGAAGCCACTGAGTTCACCATCCGAGTCGCTGCCTCGGAGCGTCTCGGCATCGACCTCTCCGACTCTCCCAGTAGGCACTTCGTCAGAACCGTCGTTGAGTCTTATCTTCTCTCCGTTGCGGCCAATGAAATCTCCAAAGACGCAGAGAAGAAGGAGAACGAAGATATTGCCGCCAAAAACGACGACGATGTGAAGAAGGGAGATGTCGTTGCGGTGCCCAAACTGAAGAGGGATGATCCCGAACGCGTTATTTGTCAACTGTCCAGCAGGAGGAACTTGGCGGTGAAACATTTCAAAGGGACAACCCTAGTCTCAATTAGGGAATTCTATATGAAAGACGGAAAACTACTTCCTGGTTCTAAAGGGATAAGTTTATCTTCTGAACAATGGTCGACCTTCAAGAAGAGTGTTCCTGCCATAGAGGAAGCTATAAAAAAGATGGAAGGAAGGATAAGATTGgagcctaatggtaagcaaaatggagatgcgtcaaattcagctgttgatgttgctcttgagcccaatgAGAACGAGTTGGAATTGGAGGACAAGAGTGAAGATCACAGGAATTTGGATGTACTCATGTGA 657 0.4186 METETRRKVEEMVLDILKKSNIEEATEFTIRVAASERLGIDLSDSPSRHFVRTVVESYLLSVAANEISKDAEKKENEDIAAKNDDDVKKGDVVAVPKLKRDDPERVICQLSSRRNLAVKHFKGTTLVSIREFYMKDGKLLPGSKGISLSSEQWSTFKKSVPAIEEAIKKMEGRIRLEPNGKQNGDASNSAVDVALEPNENELELEDKSEDHRNLDVLM 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02416 218 Gene3D Transcriptional Coactivator Pc4; Chain A 98 175 IPR009044 GO:0003677|GO:0006355
Gma19g02416 218 MobiDBLite consensus disorder prediction 200 218 - -
Gma19g02416 218 MobiDBLite consensus disorder prediction 176 218 - -
Gma19g02416 218 SUPERFAMILY ssDNA-binding transcriptional regulator domain 107 169 IPR009044 GO:0003677|GO:0006355
Gma19g02416 218 Pfam Transcriptional Coactivator p15 (PC4) 108 158 IPR003173 GO:0003677|GO:0006355
Gma19g02416 218 Pfam DEK C terminal domain 5 59 IPR014876 -
Gma19g02416 218 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 3 173 - -
Gma19g02416 218 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 3 173 IPR045125 GO:0003713|GO:0060261
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02416 Gma-Chr19 52647120 52653158 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Gma19g02416 DEK_C 3.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02416 - - gmx:100800963 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02416 19 52647120 52653158 Gma03g02373 03 48849795 48857581 GST