Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02380 ATGGGAAACAGTGAGGAAGAGAAATCTACCAAGACTGAAAAACCTTCTTCACCTGTAACAGTGGATCAAGCCAATCAGACCAACCAGACCAATATTCATGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTCACCATGCCACCATACTACAACTCAGCTGTGGCTTCTGGTCACGCTCCTCACCCATACATGTGGGGACCACCACAGCCTATGATGCCACCTTATGGGCCTCCTTATGCAGCAATTTATCCACATGGAGGGGTTTATACTCACCCTGCAGTTCCTATTGGGCCACATACACATAGTCAAGGAGTTCCATCTTCACCCGCCGCTGGGACTCCTTTAAGCATAGAGACACCACCCAAATCATCTGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAAGAGTTTGATGGACTTGCAATGTCAATAGGAAATGGCCATGCTGAAAGTGCAGAGCCTGGAGGTGAAAACAGGCTGTCAGAGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTTCAGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGTGAGGGAACACCAACCACTGATGGAGAAGGGAAAACTGAGATGCAAGGCAGTCCAATTTCCAAAGAGACTGCAGCTTCTAATAAGATGTTGGCAGTTGTCACTGCTGGTGTTGCAGGAACAATAGTTGGACCTGTAGTTTCTTCAGGTATGACCACCACGCTGGAGCTGAGAAATCCTTCCAGTGTTCATTCTAAAGCAAGTGCCCCACAACCTTGTCCAGTATTGCCTGCAGAAACTTGGTTACAGAATGAGCGTGAGCTGAAACGTGAGAGGCGGAAACAATCAAATCGAGAATCTGCTAGAAGGTCCAGACTAAGGAAGCAGGCTGAAACTGAAGAACTGGCACGGAAAGTTGAATCCTTGAATGCTGAGAATGCAACACTGAAATCAGAAATAAATCGACTGACCGAAAGTTCTGAAAAAATGAGGGTGGAAAATGCTACATTAAGGGGAAAACTTAAAAATGCTCAACTGAGACAAACACAAGAGATAACTTTGAACATAATTGACAGCCAGAGGGCTACACCTATAAGTACAGAAAACTTACTATCGAGAGTTAATAATAATTCCGGTTCTAATGATAGAACTGTGGAGGATGAGAATGGTTTTTGCGAAAATAAACCAAACTCTGGTGCAAAGCTGCATCAACTACTGGACACAAGTCCTAGAGCTGATGCTGTGGCAGCTGGTTGA 1278 0.4507 MGNSEEEKSTKTEKPSSPVTVDQANQTNQTNIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAIYPHGGVYTHPAVPIGPHTHSQGVPSSPAAGTPLSIETPPKSSGNTDQGLMKKLKEFDGLAMSIGNGHAESAEPGGENRLSESVDTEGSSDGSDGNTSGANQTRRKRSREGTPTTDGEGKTEMQGSPISKETAASNKMLAVVTAGVAGTIVGPVVSSGMTTTLELRNPSSVHSKASAPQPCPVLPAETWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNAENATLKSEINRLTESSEKMRVENATLRGKLKNAQLRQTQEITLNIIDSQRATPISTENLLSRVNNNSGSNDRTVEDENGFCENKPNSGAKLHQLLDTSPRADAVAAG 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02380 425 MobiDBLite consensus disorder prediction 280 305 - -
Gma19g02380 425 Pfam bZIP transcription factor 279 341 IPR004827 GO:0003700|GO:0006355
Gma19g02380 425 MobiDBLite consensus disorder prediction 151 216 - -
Gma19g02380 425 MobiDBLite consensus disorder prediction 1 28 - -
Gma19g02380 425 CDD bZIP_plant_GBF1 284 332 IPR045314 GO:0003700|GO:0006355
Gma19g02380 425 Gene3D - 282 337 - -
Gma19g02380 425 Pfam G-box binding protein MFMR 1 100 IPR012900 -
Gma19g02380 425 MobiDBLite consensus disorder prediction 401 425 - -
Gma19g02380 425 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 425 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gma19g02380 425 Coils Coil 299 340 - -
Gma19g02380 425 SMART brlzneu 279 343 IPR004827 GO:0003700|GO:0006355
Gma19g02380 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 281 344 IPR004827 GO:0003700|GO:0006355
Gma19g02380 425 MobiDBLite consensus disorder prediction 100 135 - -
Gma19g02380 425 MobiDBLite consensus disorder prediction 168 188 - -
Gma19g02380 425 SUPERFAMILY Leucine zipper domain 282 337 IPR046347 GO:0003700|GO:0006355
Gma19g02380 425 PANTHER G-BOX-BINDING FACTOR 3 1 425 - -
Gma19g02380 425 MobiDBLite consensus disorder prediction 14 28 - -
Gma19g02380 425 Pfam Disordered region downstream of MFMR 133 262 - -
Gma19g02380 425 MobiDBLite consensus disorder prediction 106 135 - -
Gma19g02380 425 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 286 301 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02380 Gma-Chr19 52398090 52404810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02380 1 425 bZIP Transcription Factor Family AT2G46270 52.448 4.00e-124 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma19g02380 MFMR_assoc 5.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02380 K09060 - gmx:100781875 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02380 19 52398090 52404810 Gma19g02380 19 52398090 52404810 ECH
Gma19g02380 19 52398090 52404810 Gma03g02340 03 48617431 48623510 GST