Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02367 ATGAAAATAAAAACCCATTTACCTCGGCACCTTTTGTTTGCATTTTTATTTCTCGCAGCACTCCCCGCGTATTCCCCACTTGTATCGCCTGCACCCAATGATCCTCCACAAGGTACATGTGTGCTGAAGTTCAATACGTCCCAATATGTGCCATTTGATGAGTGCGGTGATGTGAATGAGGAGATAGACAAGTGGGGTGACGATGGGTTCCCGACAACCTTGTGTTGTCGAAATGCTCTGACGGTTTTGTCGAATGCGTTGGCCTCGCAGGCCCTGAACTCAGGAGGACAAGTGTTCATTTCCCAAGATCAGTTGCAGAGTTGTGCCCAGTCATTTAACCCACAGCAAGGGGTATCGCTTAATTCATGCGGCTTTCAAAGCTTGTACCTAGGCAGTTCCAAATGCTCCAACCTCGTTTTACAGGATGTTAGGAAACTGCAACAGTACCAGGATGCATTGGACAAGTGTTCCCACTTCGACCACCCATTTGGTGAATCTTGTGCAGATTGCACCGGTGCAATATTGAGCTTGAGAGATGGTTTACATAATCAAGTGGCCAACAACAACAACAACCACACTGAGCTAGCCATATGTGAGGTAGCAGCTATTGTTGCTGTTGCAGCTGGGAAACCAAACGATCCTGTCGTTGACAAAGTCTTACGCTGCTTGCCACCTTCAGCTTCAGGATCAGACAAGAGTAGATCTTTGTGGAAACCCTTGTTGAGTGTGCCGGTAGTTATCCTTGCAATATTGCTTGTGGTTATTATGGTAAAATGTTTGTCCAAGAAGAAGTTTCGTAGACAGGCAAACTTGAAGGAGATCGTGGCGTGGTCTGGATTGTACTGGTTCTGCAAAAGGGAAATTGAGAATGCCATGAATTATGGCGGTGAAAAGATATGCCTTGGACGTGGGAGTACAGGGCAGGTGTATAGAGGTGTTCTGCCAAGTGGTCAACTCGTGGCCATCAAGCATTTAACAAAGAGTAACACCTCCGAGTCTTTCACTCGAGAAGTTGAAGGCCTTTCAAGGCTTCGCCATCCTAACCTGGTTTGCCTCTTTGGAAGTTGCATAGAAGGGGATGAGAGATATTTAGTCTATGAATTTTGTGCAAACGGAAATCTTGCTCAACATCTCTTAAGAAGAGATAGCCACTTGACATGGGAAACAAGAGTAAGAATTTTGAGAGATTGTTCATACGCACTCAAGTACCTCCACCATCATATAGAAGGCTGTGTTGTCCATAGAGATATAAAGCTTACGAACATTCTTTTGAATGAGAAATACCAAGCCAAACTATCAGATTTTGGACTGGCAAAGGTGATGGGGATTACAGAGAGCAAGGTTTTTACTGATGTTAGAGGAACAATAGGCTACATGGATCCAGAGTACATGAGTAATGCCAAGCTAACCTGCGCTAGCGATGTATACAGTTTTGGTATTGTTGCTCTACAAATTCTGTCAGGACAGAAAGTCATAGAATTGGATCTTGATGCCAGAGATCAACTCACTAGGAAGGCAAGAGATGTGAGCATGGGAAAGCGTCCACTGTCGGATTTTGAAGACCCGCGACTAAATGGAAAAGTTGATAAGGCAGACTTCGAAGCCATCCTTCAGATTGCAGTGTTGTGTGTTGCCAAATCAAGCAAAGGTCGTCCAACCATTGAGCTTGTTTTTGAGGAATTGGACAAGGTCTGCGGGGACACAGAAACACGGATGAAGCAAAAGAAGGATGAGAGCTCATCAACAACATCCACCCCGAGCTCCAAATCGGCTCCTCTATGA 1782 0.4506 MKIKTHLPRHLLFAFLFLAALPAYSPLVSPAPNDPPQGTCVLKFNTSQYVPFDECGDVNEEIDKWGDDGFPTTLCCRNALTVLSNALASQALNSGGQVFISQDQLQSCAQSFNPQQGVSLNSCGFQSLYLGSSKCSNLVLQDVRKLQQYQDALDKCSHFDHPFGESCADCTGAILSLRDGLHNQVANNNNNHTELAICEVAAIVAVAAGKPNDPVVDKVLRCLPPSASGSDKSRSLWKPLLSVPVVILAILLVVIMVKCLSKKKFRRQANLKEIVAWSGLYWFCKREIENAMNYGGEKICLGRGSTGQVYRGVLPSGQLVAIKHLTKSNTSESFTREVEGLSRLRHPNLVCLFGSCIEGDERYLVYEFCANGNLAQHLLRRDSHLTWETRVRILRDCSYALKYLHHHIEGCVVHRDIKLTNILLNEKYQAKLSDFGLAKVMGITESKVFTDVRGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPLSDFEDPRLNGKVDKADFEAILQIAVLCVAKSSKGRPTIELVFEELDKVCGDTETRMKQKKDESSSTTSTPSSKSAPL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02367 593 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Gma19g02367 593 SUPERFAMILY Protein kinase-like (PK-like) 277 560 IPR011009 -
Gma19g02367 593 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40 50 575 - -
Gma19g02367 593 Pfam Protein kinase domain 301 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g02367 593 Gene3D Phosphorylase Kinase; domain 1 255 368 - -
Gma19g02367 593 SMART serkin_6 295 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g02367 593 Pfam SPARK 36 193 IPR043891 -
Gma19g02367 593 MobiDBLite consensus disorder prediction 568 593 - -
Gma19g02367 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Gma19g02367 593 MobiDBLite consensus disorder prediction 579 593 - -
Gma19g02367 593 PANTHER OS01G0253100 PROTEIN 50 575 IPR045271 GO:0004714|GO:0006468
Gma19g02367 593 ProSiteProfiles Protein kinase domain profile. 295 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g02367 593 Gene3D Transferase(Phosphotransferase) domain 1 369 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02367 Gma-Chr19 52285555 52288762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02367 300 580 Receptor kinase-like Gene Family AT1G51800 42.466 4.33e-57 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Gma19g02367 Pkinase 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02367 - - gmx:100790391 1044.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02367 19 52285555 52288762 Gma03g02326 03 48510187 48512629 GST
Gma19g02367 19 52285555 52288762 Gma07g00609 07 6261765 6265432 PCT
Gma19g02367 19 52285555 52288762 Gma16g00294 16 3116641 3120886 PCT