Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02362 ATGGAATCCAAGAAGCAGTGGAACGAAGGAGCCAATTCATCCATCTCAATGGTTAATTATATGATTGATGACAAAGAAACAAAAATTTCAGCACTGATTGTGGATGATGACGCTATCATTCGCAAAATCCACAAGACCATGCTCGAGCGCTTATTTAACATAGAGGCAAAAACGGTTAGGGATGGAAAGGAAGCAGTGGATTTGTGTCGTTCTGGGGAAAATTTTGACATAATTTTCATGGACAAAGAAATGCCTATCATGGATGGTCACGAGGCGACAAAACATCTACGTGCTATGGGTGTGAAGAGCATCATTGTGGGAATCACTACCCGTGCTGATGGAAAAGATAAAGAGGAATTTCTAGCTTCAGGATCGAACCATTGCTTTGAGAAGCCTCTTGACCAAGCAAAGGATTTGGCTATGGCTGTACCCGTCGAGGAAGCCATTGCAGCTCTATCCACATTCTCGCTCGAGGATGAGCAACCAGAGGTGCAGGGACCTGGAGTGTGGGTATCAACTGAGAGAGGTGCAACAGAAAGTCCAATAGAGTATAGCGATGTTTCTGCTTACAGACTATCTCTATCAGAGGACACAAAAGCTCTCAATCAGCTGAATGCTCTTACCCAAGAGGGAAAGGAGATGGCATCAGTGCTTTACACATATCGTAGTTGTGTCAAAGCACTTCCTCAGCTACCTGATTCTATGAAGCAAAGTCAAGCTGACTTATATTTGGAAACATATCAAGTTCTGGATTTGGAAATGAGTCGTCTGCGTGAAATTCAGCGTTGGCAAGCATCTGCTTCCTCAAAATTAGCTGCTGACATGCAACGTTTTTCTAGGCCTGAACGACGCATTAATGGCCCTACAATATCTCATTTGTGGTCTATGTTGAAGTTGCTTGATGTTTTGGTGCAACTTGATCATCTTAAAAATGCTAAGGCTAGCATACCTAATGACTTTTCATGGTATAAAAGGACTTTCACACAAGTCAGTGGTCAGTGGCAAGACACTGATTCAATGAGGGAGGAATTAGATGATTTGCAGATTTTCTTGAGCACAAGATGGGCTATTTTGTTGAATTTGCATGTTGAGATGTTCCGTGTGAACAATGTAGAGGACATTCTTCAAGTTCTTATAGTCTTTGTTGTAGAGTCTTTAGAATTGGACTTTGCACTTCTCTTTCCAGAGCGCCACGTTCTTTTGCGTGTTTTGCCTGTTCTTGTTGTCCTAGTGACATCATCAGAGAAAGACAGTGAGTCTCTGTACAAGAGGGTGAAAATCAACAGACTGATCAATATATTTAAGAATGAAGCAGTCATTCCTGCATTTCCAGATCTGCATTTGTCTCCTGCTGCTATAGTGAAGGAATTATCAACATACTTTCCAAAATTTTCTTCCCAAACTCGCCTTCTCACCCTTCCAGCACCTCATGAGCTTCCACCTC 1444 0.4217 MESKKQWNEGANSSISMVNYMIDDKETKISALIVDDDAIIRKIHKTMLERLFNIEAKTVRDGKEAVDLCRSGENFDIIFMDKEMPIMDGHEATKHLRAMGVKSIIVGITTRADGKDKEEFLASGSNHCFEKPLDQAKDLAMAVPVEEAIAALSTFSLEDEQPEVQGPGVWVSTERGATESPIEYSDVSAYRLSLSEDTKALNQLNALTQEGKEMASVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREIQRWQASASSKLAADMQRFSRPERRINGPTISHLWSMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSGQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIVFVVESLELDFALLFPERHVLLRVLPVLVVLVTSSEKDSESLYKRVKINRLINIFKNEAVIPAFPDLHLSPAAIVKELSTYFPKFSSQTRLLTLPAPHELPP 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02362 481 Pfam CYRIA/CYRIB Rac1 binding domain 295 358 IPR009828 GO:0031267
Gma19g02362 481 PANTHER CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED 141 472 IPR008081 GO:0030833|GO:0031267
Gma19g02362 481 SUPERFAMILY CheY-like 28 136 IPR011006 -
Gma19g02362 481 Gene3D - 12 147 - -
Gma19g02362 481 SMART REC_2 29 143 IPR001789 GO:0000160
Gma19g02362 481 Pfam Response regulator receiver domain 32 137 IPR001789 GO:0000160
Gma19g02362 481 CDD REC_hyHK_CKI1_RcsC-like 32 141 - -
Gma19g02362 481 ProSiteProfiles Response regulatory domain profile. 30 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02362 Gma-Chr19 52229936 52236856 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02362 22 137 Response Regulator Gene Family AT3G04280 47.458 2.35e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma19g02362 DUF1394 1.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02362 K05749 - gmx:100775991 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02362 19 52229936 52236856 Gma03g02321 03 48421900 48478205 GST