Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02351 atggaacctattgacaaccatctcacctctttcttccaccaccaccagcagcaacAACAACAACACCAGCACCAGCACCAGCATCCGCCGCCGCCGCCGccgccgaccacggcgtcgccgaccaacggtctcttgccgaacgcggatgggtcccacatgctgtaccctcactcggtcgcgtccgcggtgtcgtcgcagcttgaaccggcgaagcggaagcgggggcggccgaggaagtacggcacgccggagcaagctctggccgcgaagaaagccgctacgacgtcgtctcagtcgttctctgcggacaagaagccccactctccgaccttcccttcctcttctttcacttcctccaagaaatccctttccttcgctctagGCAATGCAGGGCAAGGGTTCACTCCGCATGTGATTTCTGTTGCCGCTGGGGAGGATGTTGGCCAGAAAATTATGTTATTTATGCAACAAAGTAGGCGTGAGATGTGTATTCTGTCTGCATCTGGTTCCATCTCTAATGCCTCTCTTCGCCAGCCAGCAACCTCAGGAGGCAGCATTACCTATGAGGGTCGGTTTGAGATTATTTCACTTACTGGTTCTTATGTCCGTAATGAACTTGGAACTCGAACTGGTGGTCTCAGTGTATGCTTATCTAATACTGACGGGCAAATCATAGGTGGTGGAGTTGGTGGGCCACTTAAAGCAGCTGGTCCAGTTCAGGTCATCGTTGGAACATTCTTTATTGACAACAAGAAAGATAATGGTGCTGGTTTAAAAGGTGATGCCTCTGCCAGCAAGTTGCCATCTCCAGTTAGTGAACCGGTATCAAGTTTAGGTTTCCGCCAATCAGTTGACTCTTCCAGTGGTAATCCAATCCGCGGAAATGATGAGCATCAAGCTATGGATGGAAGTCATTTCATGATTCAACAGCTTGGTTTGCATGGAACACCTCCCCGATCCACAGACTGGGGTCGTCCGGATTCAAGAAATACCGGTTTTGAGTTGACAGACTAA 1014 0.3185 MEPIDNHLTSFFHHHQQQQQQHQHQHQHPPPPPPPTTASPTNGLLPNADGSHMLYPHSVASAVSSQLEPAKRKRGRPRKYGTPEQALAAKKAATTSSQSFSADKKPHSPTFPSSSFTSSKKSLSFALGNAGQGFTPHVISVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATSGGSITYEGRFEIISLTGSYVRNELGTRTGGLSVCLSNTDGQIIGGGVGGPLKAAGPVQVIVGTFFIDNKKDNGAGLKGDASASKLPSPVSEPVSSLGFRQSVDSSSGNPIRGNDEHQAMDGSHFMIQQLGLHGTPPRSTDWGRPDSRNTGFELTD 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02351 337 MobiDBLite consensus disorder prediction 10 25 - -
Gma19g02351 337 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 26 329 IPR039605 GO:0003680
Gma19g02351 337 ProSiteProfiles PPC domain profile profile. 130 271 IPR005175 -
Gma19g02351 337 MobiDBLite consensus disorder prediction 323 337 - -
Gma19g02351 337 Gene3D - 136 260 - -
Gma19g02351 337 MobiDBLite consensus disorder prediction 269 294 - -
Gma19g02351 337 MobiDBLite consensus disorder prediction 259 337 - -
Gma19g02351 337 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 246 IPR005175 -
Gma19g02351 337 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 26 329 - -
Gma19g02351 337 MobiDBLite consensus disorder prediction 1 117 - -
Gma19g02351 337 CDD DUF296 135 246 IPR005175 -
Gma19g02351 337 MobiDBLite consensus disorder prediction 89 117 - -
Gma19g02351 337 MobiDBLite consensus disorder prediction 26 40 - -
Gma19g02351 337 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02351 Gma-Chr19 52110708 52116676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02351 49 323 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 54.762 7.55e-83 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02351 - - gmx:100816781 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02351 19 52110708 52116676 Gma19g02351 19 52110708 52116676 ECH
Gma19g02351 19 52110708 52116676 Gma03g02314 03 48343388 48349295 GST