Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02334 ATGTCTACATCTTCTCGTGCTCTTCCCACTCCCTTGGAAAACAAGTATATGAAACCCCCAGATTCTTTTCAGCTTTCACCCGTCAGAGATCTGACTGCAAATTCTGCCTCATCAAATTCAATCAGAAGTGCTGGGAAGATGTTGTCTTCACCTTCTGAATGTCCCGATGATATCCCTTTTTCCTTTGTTTCTCAGACATCAGGTGACAATGTGTCTTCCGAAATTCATTCAACAGCATTGATTTCTCACCCTCAAGATAATGAAGATCTTTCCTGGGGACCAGATCCATTTCAGGATATTCTTGGCTTTCCTGAAAATGTTTCTGTCCAGCATGATCAGGTGCAAAACAATGGTTGTTACATAAATGATGATAATGTCAAAAGATCTGATTTTGGGGAGTGGGTTGATCAGTTAATGTCAATTGATGATTCTCTTCACCCGAACTGGAGTCAACTTCTTGGTGATGACAATGTAGCAGAACCAAAACCAAAGGCATCTCATGTTCCTCAGCAGCAGCATATAGCATCTGTAGAAGTTGTTGGCAATTCAGCATCAACTGCACCGCAGACTAAGCCTAGAATGCGTTGGACTCCAGAACTTCACGAGGCCTTTGTGGAAGCAGTTAATCAGCTTGGTGGTAGTGATAAGGCTACTCCAAAGGGTGTGTTGAATCTAATGAAAGTTGAGGGCCTTACTATCTATCATGTAAAAAGCCACTTGCAGAAGTATAGAACTGCCAGATATAAACCAGAGCCGTCAGAAGGAAATTCTGAGAAAAAGGTGACTCCAATGGAAGAAATGAAATCTCTAGATTTGAAAACGAGTAAGGGGATCACTGAAGCATTACGTTTACAGATGGAACTCCAGAAGCGACTTCACGAACAACTTGAGATCCAAAGAAAGTTGCAGATTCAAATTGAAGACCAAGGGAAACGTCTTCAGATGATGTTTGAGAAACAGGGAGAGATGGGTGACAACAAGGTTAATGGCTCCTCGGACACAAACGAGGAAGGCGACAAATTTGAAAGCATTCCAAAAGCCATGCCTGAAGAGAAGGATTCAAGCACAAGAAAACAAATAGCAGGTGAAGCTGAAGAAGTGATCAATGAAGATGAAGCTGCACCACCCACAAAACGGGTGAAAAGTTCATAA 1152 0.421 MSTSSRALPTPLENKYMKPPDSFQLSPVRDLTANSASSNSIRSAGKMLSSPSECPDDIPFSFVSQTSGDNVSSEIHSTALISHPQDNEDLSWGPDPFQDILGFPENVSVQHDQVQNNGCYINDDNVKRSDFGEWVDQLMSIDDSLHPNWSQLLGDDNVAEPKPKASHVPQQQHIASVEVVGNSASTAPQTKPRMRWTPELHEAFVEAVNQLGGSDKATPKGVLNLMKVEGLTIYHVKSHLQKYRTARYKPEPSEGNSEKKVTPMEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIEDQGKRLQMMFEKQGEMGDNKVNGSSDTNEEGDKFESIPKAMPEEKDSSTRKQIAGEAEEVINEDEAAPPTKRVKSS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02334 383 Gene3D - 190 249 - -
Gma19g02334 383 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 383 IPR044848 GO:0003700
Gma19g02334 383 MobiDBLite consensus disorder prediction 1 52 - -
Gma19g02334 383 SUPERFAMILY Homeodomain-like 189 245 IPR009057 -
Gma19g02334 383 MobiDBLite consensus disorder prediction 27 47 - -
Gma19g02334 383 Coils Coil 279 299 - -
Gma19g02334 383 Pfam Myb-like DNA-binding domain 193 244 IPR001005 -
Gma19g02334 383 MobiDBLite consensus disorder prediction 321 383 - -
Gma19g02334 383 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 383 - -
Gma19g02334 383 Pfam MYB-CC type transfactor, LHEQLE motif 278 322 IPR025756 -
Gma19g02334 383 MobiDBLite consensus disorder prediction 332 383 - -
Gma19g02334 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 189 248 IPR017930 -
Gma19g02334 383 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 191 245 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02334 Gma-Chr19 51960755 51964855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02334 9 358 G2-like Transcription Factor Family AT4G28610 44.186 6.29e-81 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma19g02334 Myb_DNA-binding 9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02334 - - gmx:100813604 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02334 19 51960755 51964855 Gma03g02298 03 48194985 48199201 ECH
Gma19g02334 19 51960755 51964855 Gma19g02334 19 51960755 51964855 ECH
Gma19g02334 19 51960755 51964855 Gma03g02298 03 48194985 48199201 GST
Gma19g02334 19 51960755 51964855 Gma10g00372 10 3548067 3554404 PCT
Gma19g02334 19 51960755 51964855 Gma13g01069 13 24858690 24863146 PCT