Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02311 ATGGAGGCAGAGCCAGACAAGTACAAGATGATCAACTTTGAAGAAACCGAGTTGCGACTCGGCCTGCCACTCAGTGGAAACGAGACGACGCTCAAAAACACTTGCAGTACTGGGAAGAGGGTTTTTTCGGATACTAGCGTGGATTTGAAGCTTAACCTTTCCTCAACCTCAAATAACGCCCCTCCTCCTGCAAAGCCACCCGCAAAGGCACAAGTGGTGGGGTGGCCACCAGTGAGGTCATTCAGAAAGAACATTGTAAACAACGTTCAAAGGAGTAACAACAACGATGGCGAAAAAGCCGCCACAAGTAGTAGCAACAATGTGAACATGGGAGCAGCTTTCGTGAAGGTGAGCATGGATGGTGCTCCCTATTTACGCAAGGTGGATTTGAAGATGTACAAGAGCCACCAAGAGCTGTTGGATGCACTGGCTAAAATGTTCAGTTCATTCACCATCGACAAGTGTAGTTCCCAAGGCATGAAAGACTTCATGAACGAGGGCAAATTGATTGATCTTCTCAACGGCTCTGATTACGTACCAACCTGTGAAGACAAAGATGGTGATTGGATGCTCGTGGGTGACGTACCTTGGGAAATACTCGTGGAATCATGCAAGCGCCTGCGTATAATGAAAGGATCTGCGGCAATCGGGCTAGCACCAAGAGCAGTGCAAAAGTGCAAGAACAGAAGCTAG 693 0.4805 MEAEPDKYKMINFEETELRLGLPLSGNETTLKNTCSTGKRVFSDTSVDLKLNLSSTSNNAPPPAKPPAKAQVVGWPPVRSFRKNIVNNVQRSNNNDGEKAATSSSNNVNMGAAFVKVSMDGAPYLRKVDLKMYKSHQELLDALAKMFSSFTIDKCSSQGMKDFMNEGKLIDLLNGSDYVPTCEDKDGDWMLVGDVPWEILVESCKRLRIMKGSAAIGLAPRAVQKCKNRS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02311 230 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 223 IPR003311 GO:0005634|GO:0006355
Gma19g02311 230 Gene3D - 106 224 - -
Gma19g02311 230 PANTHER AUXIN-INDUCED PROTEIN AUX28 8 223 - -
Gma19g02311 230 ProSiteProfiles PB1 domain profile. 112 212 IPR000270 GO:0005515
Gma19g02311 230 SUPERFAMILY CAD & PB1 domains 105 211 - -
Gma19g02311 230 Pfam AUX/IAA family 36 221 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02311 Gma-Chr19 51805503 51807996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02311 115 209 B3 DNA Binding Superfamily AT3G61830 32.632 1.94e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Gma19g02311 AUX_IAA 8e-77 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02311 K14484 - gmx:100803986 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02311 19 51805503 51807996 Gma03g02274 03 48013328 48015961 ECH
Gma02g01298 02 15048424 15051821 Gma19g02311 19 51805503 51807996 ECH
Gma19g02311 19 51805503 51807996 Gma19g02311 19 51805503 51807996 ECH
Gma19g02311 19 51805503 51807996 Gma03g02274 03 48013328 48015961 GST