Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02308 ATGAATCGTAGCGAATCGGAGTGGGCCTTTCAGCAGTTCCTACAGGAAGCTGCTGCTTCTTCTTCCTCTAATTCTGATCATCATCATCTTAAATTCAAAAACGAATTCAACATCAACATCCCTGTTACTACTACTTCTATTCAAAATATTAATGTTGATTCCCAAGACTACCATGCTATTCTTAAGACCAAGCTTAATCTCGCATGCGCTGCTGTTGCTATGACTCGGGGATCTTTGGTCAAATCTCAAAACCCTGCCACTTTCTCTGACAGTGGACCACAGGCATCTAATTCTTCTGAAGATGGATTGCAGGCTACCTTAAAAGGATCTGGCCCTTCTGGAAATGATCCCTCTAAATTACAAAATAAAGATGTCAAAGCACAAATTGGGATTCCTTCCTCATCTTCCATGCAAAACAAACCTGCTGTCGCAATGAGGCCAACGATAAGTGGATCATCAGGAGAACAATCAGATGATGAGGAAGTGGAGGGAGAGATTAATATGACTGAAAACATGACTCCTGTTGATGCAAAACGAGTAAGGAGGATGCTTTCTAATAGGGAGTCAGCCAGACGCTCAAGAAGGAGAAAGCAGGCTCATTTAACTGAGCTGGAGACACAGGTCTCCCAATTACGAAGTGAAAATTCTTCGTTGTTAAAGCGATTCACGGATGTGAGCCAGAAATACAATAATGCTGCAGTTGACAACAGAGTACTGAAAGCTGATGTTGAAACATTAAGAACAAAGGTGAAGATGGCTGAAGAGACAGTGAAAAGAATTACTGGGTTGAACCCAATGCTTCATGCCATAACTGAGATGTCATCAATGGCAATGCCATCGTTTGATGAAAGTCCTTCTGAGACATCAGCTGATGCTGCTGTTTCTGTGCAAGAAGACCCAAATCATCACCGTTGTCAACCCACTTCTAATAATGGGTTGGGAGGCATTTCTTCAATTGAAACTGTGCAGCAGAATGTTGCAGCAGTGGTAGGTGGCAACAAAACGGGGAGAACAACTTCCCTGCATAGAGTGGCTAGCTTGGAACATCTTCAGAAGAGGATTCGTGGTGGTGCAGATTCACGTGGACCTCCTTCTAATGGAGAACAATAA 1110 0.4297 MNRSESEWAFQQFLQEAAASSSSNSDHHHLKFKNEFNINIPVTTTSIQNINVDSQDYHAILKTKLNLACAAVAMTRGSLVKSQNPATFSDSGPQASNSSEDGLQATLKGSGPSGNDPSKLQNKDVKAQIGIPSSSSMQNKPAVAMRPTISGSSGEQSDDEEVEGEINMTENMTPVDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRSENSSLLKRFTDVSQKYNNAAVDNRVLKADVETLRTKVKMAEETVKRITGLNPMLHAITEMSSMAMPSFDESPSETSADAAVSVQEDPNHHRCQPTSNNGLGGISSIETVQQNVAAVVGGNKTGRTTSLHRVASLEHLQKRIRGGADSRGPPSNGEQ 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02308 369 SMART brlzneu 174 238 IPR004827 GO:0003700|GO:0006355
Gma19g02308 369 MobiDBLite consensus disorder prediction 279 316 - -
Gma19g02308 369 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 176 230 IPR004827 GO:0003700|GO:0006355
Gma19g02308 369 MobiDBLite consensus disorder prediction 80 155 - -
Gma19g02308 369 Pfam bZIP transcription factor 177 229 IPR004827 GO:0003700|GO:0006355
Gma19g02308 369 Pfam Basic leucine-zipper C terminal 245 358 IPR020983 -
Gma19g02308 369 PANTHER BZIP TRANSCRIPTION FACTOR 1 350 - -
Gma19g02308 369 PANTHER BASIC LEUCINE ZIPPER 63 1 350 - -
Gma19g02308 369 Gene3D - 177 232 - -
Gma19g02308 369 Coils Coil 236 256 - -
Gma19g02308 369 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 181 196 IPR004827 GO:0003700|GO:0006355
Gma19g02308 369 SUPERFAMILY Leucine zipper domain 178 229 IPR046347 GO:0003700|GO:0006355
Gma19g02308 369 Coils Coil 187 221 - -
Gma19g02308 369 MobiDBLite consensus disorder prediction 80 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02308 Gma-Chr19 51771421 51776754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02308 1 267 bZIP Transcription Factor Family AT4G02640 39.262 8.29e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma19g02308 bZIP_C 5.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02308 K25784 - gmx:100798673 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02308 19 51771421 51776754 Gma19g02308 19 51771421 51776754 ECH
Gma19g02308 19 51771421 51776754 Gma03g02271 03 47982915 47988055 GST
Gma19g02308 19 51771421 51776754 Gma10g01596 10 43055342 43058496 PCT
Gma10g01596 10 43055342 43058496 Gma19g02308 19 51771421 51776754 PCT