Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02295 ATGTTCGATGGAGCACCAGACCAGTTCCACCAATTCATAGCACCAAGGACCACTCTTCCTCTCCACCTGTCTTTCCCTCTCCACCATCATGCCTCTTCAACCCCTCCTCCAAATACCTTCCTACCCTTTGATCCATATAACCCTTCTTCTCATCATCTCTTGCCATCACTCCAAACCAATCATCTCTTGCACCCCCCTACTACTTCCCCCACCCACAAACACGAACAAGACAAGGTTATTGCTCCAATCGTCAACAACAATGAAGAGATTCAAAGAGATCAAAGACAATTACCAGATCAGCTAACCGATTCCTGGACCAACGATGAAGTGCTTGCACTTTTCAGAATCAGATCTAGCATGGAAAATTGGCTCCCAGAGCTCACATGGGACCATGTCTCAAGGAGGCTAGCAGAGGTTGGGTTTAAGAAGAGTGCTGAGAAGTGCAAGGAGAAGTTTGAAGATGAGAGTAGATATTTCGACAACATCAATAACTACGGCAAGAACAATTTCCGGTTCCTTATTAGCGAGCTGGAGGAGCTTTGTCAAAACTCTGATCCTGGTGCTCATGATCATAATGGGGTTGTAGTGAGGAGTGAAAAGACTCACCACCTAGGAGGACACGCATTGGAAGAAAATTCGAGAGACATTGAAACAACTACAGCGACCAAACGATGTGATATTGGAAGTGACACAGTGGTGGAGAAGTCAAATTCAAAGGTGCGCAAGAGGAAGAGGCGTGATAGGTTCGAAATGTTCAAGGGTTTTTGCGAGAGTGTTGTCAACAAGATGATGGCTCAGCAAGAAGAGACTCACAACAAGCTCCTCGAGGACATGGTGAAAAGGGACCAAGAGAAGTTCGCCAGAGAAGAAGCTTGGAAGAAGCAAGAGTTGGATAGGATGAAAAAGGAGCTTGAGATTATGGCACAAGAGCAAGCCATTGCCGGGGATAGACAAGCCACCATAATTGAATTCTTAAAGAAATGTGCAACAACAACAATAACTTCATTATCCCCTCCAAGCCAAAATGCCAAGTACTACATCACAAATGATTCAAATCTTCCAAATTGTGCATCGCATTCGCAAAACCCTAATAATCCTTCCAATGAAGACAACAATCTTGAGCCAACACCTTCTTCTAAAATGATTCAAAATCATGGCCAAACTACGTTGGGAGCAGAAAACCCTAGCACAAGTGACACATTATTACAAGTTCCTTCTTCCTCCAACTCTTCCCCAACAACCCACAACCCTAGTTCTTCACTCAATAGCCACAATAACATTATCCCACTAGAGTCAAATTCAGTTTCGACATACAAGCCCACCTCAACAACCCCTATGGCCAGCAGTGAGAATTCGAAAGATGATATTGGGAGAAGATGGCCAAGAGATGAAGTGTTAGCACTGATAAACCTAAGGTGCACAAGTCTAAGCAGCAATGAAGAGAAAGAAGGAAACAAGGGTCCTCTGTGGGAGAGAATCTCGCAAGGGATGTCAGCGCTGGGATACAAGAGAAGTGCAAAGAGGTGCAAGGAGAAGTGGGAGAACATAAACAAGTACTTCAGAAAAACCAAGGATAATGTTAATAAGAAAAGTATGCATGTTGATCATGCAGTTGTGCATGGTGGATGTTTGGAGGAGAACACTAGAAGAGGGGGACCTTTAGAATCCTGCGATAATCTCCCGTTTAATTCAGAACAGAGCTTCTTCCTCTGCTGCTGCTCCAACAACGGTGTCGTTTTGCACTTCCTCTGCCAATGTCGAAGCTCGCATTCTCAGATTCGTCTATTCCCTCTACCTTTTGAATCCCTTCTATCTCCTCAACTTCTTCTTTCCCCGTCTCAGGAGAGGGAAcataagcacgagaagaaaaaATATGTGCTGAAGAAGATTCGCCTTGCCCGCCAAACTGAGCGCTCTCGTAGGTCTGCACACCTGGAGATGGAGCTCCTCTCCAAATTAAGAAATCCATTTCTTGTGGAGTATAAAGATTCATGGGTAGAAAAGGGTTGCTATGTGTTCATTATTATAGGTTATTGTGAGGGTGGAGACATGGCGGAAGCTATAAAGAAAGCTAGTGGTGTTATGTTTCCTGAGGAGAAACTATGTAAGTGGCTTGTTCAACTTCTTATGGCACTTGATTACTTGCACGTGAATCATATTCTTCATCGTGATGTCAAGTGTTCAAATATATTCTTGACGAAAGATCATGACATACGCCTTGGTGATTTTGGACTTGCCAAAATGTTGACTTCAGATGATCTAACTTCCTCTGTTGTGGGAACTCCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATACCTTATGGCTCTAAATCAGATATTTGGTCCTTGGGATGTTGTATATACGAAATGACCTCCCTCAAGCCTGCATTCAAAGCATTTGATATACAAGCCCTGATTAACAAGATTAATAAGTCCATAGTGGCCCCATTGCCAACAAAATACTCTGGTGCATTTCGAGGTCTTGTTAAAAGCATGCTGCGGAAAAATCCAGAGCTTAGGCCTAGTGCTGCAGAGCTACTTGGGCACCAACATCTTCAACCTTATGTTCTTAAGGTCCATCTCAAAATCAATAGCCCCAGGCGAAGTACATTGCCAGGCCATTGGCCAGAATCCAATTACATGGAGAAAACTAGATTTTTGAAGTCTGAAGATGATCCTGTTTCCTTCTCAGGGAATAAGAGGCATTCTTTTAGCTATGATCGGACTTTAAATCCTAGTATATCTGGAGCAGAGCAAGATTCTCTATGCTCTACGCTAGAGATTGATTGTACTCCTGATAATTTAAATCAAAGATTTGCCGAACTTTCTGTTGGAGACAACCATGACGTGAAGTCACTCCATAAGCCAGTTGCTTCCAGAACTTCTAGTAAAGCCAGGACTCCTAGACTAACTGCATCAAAAGCTTCTGCCGCCCCCAAGAAATCAATGGTATCCTCAAAGAATCATAAGACGCTTCCTGTTTCACACAATATGAAAGAACCTGTCCATACAACTCGCAGAGCATCATTGCCGTTCCCAAGAAGTTGTACCATACAGCAGCCTCCTCGCAGGGCCAGTATTGGTTTACTTGACCATGTAAATTCGCTCAATATTTCAGTTAACTCTCCTCGTATTGATAGGATAGCAGAATTCCCATTAGCATCATATGAAGATCAATTGTTTCCCATCAATAGTTCTTCACCAAACTCGGCACAGGGTTCCTCAGGCTTCCCTCCTTGTGGCAATGATTCAACTTTGATTGACAAATGCACAATCAAGGTATGTGACACATCCTATGTTAGGCCAGGATGTACGGATGCTTGGCAGGGAATCACGAACAGCATGTTCAAGAAAAACGATGAGGATAAAAGTGGCTCATCTGATCAAAATGCAACTGCTGGAGCATCAAGCCACAACTCTTCAGACCTGCGCCACCGACAGTTTGATACATCATCATTCCGACAAAGGGCTGAGGCCTTAGAAGGTTTGCTTGAATTTAGTGCAAGATTACTACAGCAGGAAAGGTATGGAGAACTTGGAGTTTTATTAAAACCGTTTGGGCCAGGGAAAGCTTCCCCGAGGGAAACTGCTATTTGGTTGAGCAAGAGTTTAAAAGAGAACACTTTCAGCCGGGAACAATCCACCCCACCTAAATTGCTGTAA 3666 0.4345 MFDGAPDQFHQFIAPRTTLPLHLSFPLHHHASSTPPPNTFLPFDPYNPSSHHLLPSLQTNHLLHPPTTSPTHKHEQDKVIAPIVNNNEEIQRDQRQLPDQLTDSWTNDEVLALFRIRSSMENWLPELTWDHVSRRLAEVGFKKSAEKCKEKFEDESRYFDNINNYGKNNFRFLISELEELCQNSDPGAHDHNGVVVRSEKTHHLGGHALEENSRDIETTTATKRCDIGSDTVVEKSNSKVRKRKRRDRFEMFKGFCESVVNKMMAQQEETHNKLLEDMVKRDQEKFAREEAWKKQELDRMKKELEIMAQEQAIAGDRQATIIEFLKKCATTTITSLSPPSQNAKYYITNDSNLPNCASHSQNPNNPSNEDNNLEPTPSSKMIQNHGQTTLGAENPSTSDTLLQVPSSSNSSPTTHNPSSSLNSHNNIIPLESNSVSTYKPTSTTPMASSENSKDDIGRRWPRDEVLALINLRCTSLSSNEEKEGNKGPLWERISQGMSALGYKRSAKRCKEKWENINKYFRKTKDNVNKKSMHVDHAVVHGGCLEENTRRGGPLESCDNLPFNSEQSFFLCCCSNNGVVLHFLCQCRSSHSQIRLFPLPFESLLSPQLLLSPSQEREHKHEKKKYVLKKIRLARQTERSRRSAHLEMELLSKLRNPFLVEYKDSWVEKGCYVFIIIGYCEGGDMAEAIKKASGVMFPEEKLCKWLVQLLMALDYLHVNHILHRDVKCSNIFLTKDHDIRLGDFGLAKMLTSDDLTSSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDIQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLGHQHLQPYVLKVHLKINSPRRSTLPGHWPESNYMEKTRFLKSEDDPVSFSGNKRHSFSYDRTLNPSISGAEQDSLCSTLEIDCTPDNLNQRFAELSVGDNHDVKSLHKPVASRTSSKARTPRLTASKASAAPKKSMVSSKNHKTLPVSHNMKEPVHTTRRASLPFPRSCTIQQPPRRASIGLLDHVNSLNISVNSPRIDRIAEFPLASYEDQLFPINSSSPNSAQGSSGFPPCGNDSTLIDKCTIKVCDTSYVRPGCTDAWQGITNSMFKKNDEDKSGSSDQNATAGASSHNSSDLRHRQFDTSSFRQRAEALEGLLEFSARLLQQERYGELGVLLKPFGPGKASPRETAIWLSKSLKENTFSREQSTPPKLL 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02295 1221 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 618 1201 - -
Gma19g02295 1221 ProSiteProfiles Myb-like domain profile. 459 517 IPR001005 -
Gma19g02295 1221 Gene3D - 105 161 - -
Gma19g02295 1221 Gene3D - 460 522 - -
Gma19g02295 1221 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Gma19g02295 1221 CDD STKc_Nek 617 853 - -
Gma19g02295 1221 Pfam Protein kinase domain 618 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g02295 1221 SMART serkin_6 617 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g02295 1221 Gene3D Transferase(Phosphotransferase) domain 1 679 866 - -
Gma19g02295 1221 ProSiteProfiles Protein kinase domain profile. 598 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g02295 1221 PANTHER SERINE/THREONINE-KINASE NEK4 618 1201 - -
Gma19g02295 1221 MobiDBLite consensus disorder prediction 957 971 - -
Gma19g02295 1221 MobiDBLite consensus disorder prediction 952 995 - -
Gma19g02295 1221 Gene3D Phosphorylase Kinase; domain 1 614 678 - -
Gma19g02295 1221 MobiDBLite consensus disorder prediction 354 451 - -
Gma19g02295 1221 MobiDBLite consensus disorder prediction 1119 1146 - -
Gma19g02295 1221 ProSiteProfiles Myb-like domain profile. 97 156 IPR001005 -
Gma19g02295 1221 MobiDBLite consensus disorder prediction 979 993 - -
Gma19g02295 1221 MobiDBLite consensus disorder prediction 354 458 - -
Gma19g02295 1221 CDD GT1 458 524 - -
Gma19g02295 1221 Pfam Myb/SANT-like DNA-binding domain 458 531 IPR044822 -
Gma19g02295 1221 Pfam Myb/SANT-like DNA-binding domain 103 167 IPR044822 -
Gma19g02295 1221 SUPERFAMILY Protein kinase-like (PK-like) 618 897 IPR011009 -
Gma19g02295 1221 MobiDBLite consensus disorder prediction 1127 1142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02295 Gma-Chr19 51670068 51686570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02295 249 530 Trihelix Transcription Factor Family AT5G28300 43.643 1.37e-58 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Gma19g02295 Pkinase 4.9e-54 CL0016
TF Trihelix Gma19g02295 Pkinase 4.9e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02295 K08857 - gmx:100796019 1206.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02295 19 51670068 51686570 Gma19g02295 19 51670068 51686570 ECH
Gma19g02295 19 51670068 51686570 Gma03g02260 03 47913490 47919133 GST
Gma19g02295 19 51670068 51686570 Gma10g01590 10 42973584 42979761 PCT
Gma10g01590 10 42973584 42979761 Gma19g02295 19 51670068 51686570 PCT