Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02289 ATGAATCAGCTTCAAGCATCTGAGTTTGTTGAACTTGATCCAACTGCCAGATACGGCAGATACAATGAAATCCTCGGCAAAGGAGCTTCCAAGACAGTATATAGAGCATTTGATGAGTACCAAGGGATTGAAGTTGCTTGGAATCAGGTTAAATTGTATGATTTTCTGCAGAGCCCTGAAGATCTCGAGAGGCTTTACTGTGAAGTTCATCTCCTCAAGACGTTGAAGCACAGAAGCATAATGAAATTTTACACTTCTTGGGTTGATACAGCGAACAGAAATATCAACTTTGTGACTGAAATGTTCACTTCTGGTACCCTTAGACAATATAGGCAAAAGCACAAGAGAGTTAACATTAGGGCAGTGAAGCATTGGTGTAGACAAATCCTGAGAGGGCTTCTCTATCTTCATAGCCGTGACCCACCTGTGATCCATAGAGATCTTAAATGTGATAATATTTTTGTCAACGGAAACCAAGGGGAAGTTAAGATTGGGGATCTTGGGTTGGCAGCAATTGTCCGCAAGTCCCATGCTGCTCATTGTGTAGGAACGCCCGAGTTCATGGCACCAGAAGTTTATGAAGAGTCGTATAATGAACTAGTTGACATATATTCCTTTGGGATGTGTGTATTAGAAATGGTCACATTTGAATATCCTTATAGCGAATGTAGCCATCCAGCACAAATCTACAAGAAAGTTATTTCTGGGAAGAAACCGGATGCCTTGTATAAAGTGAAGGATCCAGAAGTGCGAAAATTTGTTGAGAAATGCCTGGCAACAGTGTCTCTAAGGCTCTCTGCAAGGGAGCTTCTAGATGATCCTTTTCTTCAGATTGATGATTATGAGTATGATTTGGGACCGGTGGACAGTGGATCATTTGATGACTTGGGTCCTCTTACCCATCAGCCATTCTTTGATCTCCACCGGACCTATAGTAACATGAGTACTGAATACTCGAATGGCTTTGAATATGAAGGAGACTGGTATTCTCATCCAGCTGAGATTGAACCTAGTGGAATTGAACTTTTCGAGTGCCATGACGATGAAGCCTCTGAAGATGTTGACATAAGCATTAGAGGCAAGAGGAAAGATGACGGTGGCATCTTTTTGAGACTAAGAATTGCAGACAAAGAAGGCCATATTCGGAATATTTATTTCCCATTTGACACAGAGACGGACACAGCATTAAGTGTAGCAACTGAAATGGTTGCAGAACTCGACATTACTGATCAGGATGTTACCAGTATATCAGATATGATAGACGGGGAAATTGCTTCCTTGGTACCTGAATGGAAGCCAGGACCAGGAATTGAAGAAACTAACCATTATTTAAATAAAATTGTTTGTCACAATTGTGTGTCTAATCAAGGCAGAAAGAACTTGCAGCTTCCTCAATGTTGTAGGCATGGATGTGCTTCAATGCATGGGCGCTTCGAGGAGATTACCTTCCCATCTGAGTGTGACAATCATGTTAGAGGGGATGCACCTATCAAATCAAGCCAATCAGACTGCTTGCAGTATCAGGAGTCATGGAATCATCATGAAAGTTGTGAACTGAGTCCAGTAGAGTCTGACCAAAGTCATTCTGGCGAGCAATATGAACAATTTGATAAACCAGTATTAGCAGAAGACAAAGAAGGAAAGGGTATTTGGGAAAACAAGTTTGCACATGATCCAGGAAACCCCCCACGAAGTTTATCAGGAAATTATTTCTCTGCTATCCGTTTTTTATGTTGTGGCCCTGAGAATGAATATGAGAAAGAGGTTCAACAAGAAATGAGATGGATCAAAGCAAAACACGAAAGGGAGTCAAGGAAACTTAGGGATAAACTGTTTGGTATAGCAGCTAAATCTTCACATACCAGTAACAGAGAGCACAAAACCCAACAAGGCATTATGCCACCACTGCCACAAACAGTAAACGGAGTGGACCATGGTATTCACTTGAAACCCTTGGGTAATTTCTGGAATTATGATTCAGTTGCCGTTCTCAAGTCCAAAAGAACCACCCCAATTTGGGCACCCAAAGGGCCCAAAATTGTGAGGTGA 2049 0.4168 MNQLQASEFVELDPTARYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEVHLLKTLKHRSIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRQKHKRVNIRAVKHWCRQILRGLLYLHSRDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIVRKSHAAHCVGTPEFMAPEVYEESYNELVDIYSFGMCVLEMVTFEYPYSECSHPAQIYKKVISGKKPDALYKVKDPEVRKFVEKCLATVSLRLSARELLDDPFLQIDDYEYDLGPVDSGSFDDLGPLTHQPFFDLHRTYSNMSTEYSNGFEYEGDWYSHPAEIEPSGIELFECHDDEASEDVDISIRGKRKDDGGIFLRLRIADKEGHIRNIYFPFDTETDTALSVATEMVAELDITDQDVTSISDMIDGEIASLVPEWKPGPGIEETNHYLNKIVCHNCVSNQGRKNLQLPQCCRHGCASMHGRFEEITFPSECDNHVRGDAPIKSSQSDCLQYQESWNHHESCELSPVESDQSHSGEQYEQFDKPVLAEDKEGKGIWENKFAHDPGNPPRSLSGNYFSAIRFLCCGPENEYEKEVQQEMRWIKAKHERESRKLRDKLFGIAAKSSHTSNREHKTQQGIMPPLPQTVNGVDHGIHLKPLGNFWNYDSVAVLKSKRTTPIWAPKGPKIVR 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02289 682 ProSiteProfiles Protein kinase domain profile. 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g02289 682 Gene3D Transferase(Phosphotransferase) domain 1 102 281 - -
Gma19g02289 682 SUPERFAMILY Protein kinase-like (PK-like) 22 277 IPR011009 -
Gma19g02289 682 Gene3D Phosphorylase Kinase; domain 1 4 100 - -
Gma19g02289 682 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g02289 682 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 4 670 - -
Gma19g02289 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Gma19g02289 682 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 369 422 IPR024678 GO:0004674|GO:0005524
Gma19g02289 682 Gene3D - 366 432 - -
Gma19g02289 682 CDD STKc_WNK 17 276 - -
Gma19g02289 682 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 670 - -
Gma19g02289 682 SMART serkin_6 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02289 Gma-Chr19 51621223 51624484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02289 7 481 MAP Kinase Kinase Kinase AT3G22420 57.905 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gma19g02289 Pkinase 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02289 K08867 - gmx:100272199 1391.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02289 19 51621223 51624484 Gma19g02289 19 51621223 51624484 ECH
Gma19g02289 19 51621223 51624484 Gma03g02254 03 47854166 47857218 GST
Gma19g02289 19 51621223 51624484 Gma10g01580 10 42872932 42876461 PCT
Gma19g02289 19 51621223 51624484 Gma20g02129 20 48556305 48559683 PCT
Gma10g01580 10 42872932 42876461 Gma19g02289 19 51621223 51624484 PCT
Gma20g02129 20 48556305 48559683 Gma19g02289 19 51621223 51624484 PCT