Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02276 ATGGGCGCACAGAAGAAAAGGGTTTCAGAGGACCCCGACGAACTGGTGCGGGTTCCGTTGCAGGCCATTCTCTTGGCTGATAGTTTCACCACCAAGTTCAGACCTATCACACTCGAACGCCCCAAAGTGCTGCTGCCGCTCGTGAATGTTCCGATGATAAATTACACGCTCACTTGGCTCGAATCCGCTGGCGTCGAAGATGTTTTCGTTTTCTGTTGTTCTCATTCCAAGCAGGTCATTAGCTACCTCGAGAAATCTGAGTGGCTCTCTCAACCTAATTTTACGGTGACGACTGTAGAGTCGCAGAATTCTGTCAGCGCTGGAGATGCGCTACGTGTAATTTACGAGCGCAATGTGATACATGGAGACTTTGTCCTTATCAGTGGAGATACTGTAAGCAATATGTCTCTTACTCAAGCACTTCTAGAGCATAAAGAAAGGAAGAAGAAAGATAGTAATGCTGTAATGACTATGGTCATTAAACGGTCAAAACCTAATCCAGCTATCCATCAGTCTCGACTTGGTACTGATGAGCTTTTCATGGCCATTGATCCTAATACCAAGCAACTTCTGTATTATGAGGATAAGGCAGACCAATCAAAAGGAAAACTACATCTTGACAAGTCATTGCTTTTTGATAATCCTTCACTCTCTCTGCATCATGACAAGCAGGATTGTTACATTGACATCTGCTCACCTGAAGTCCTTAGCCTATTTACAGACAATTTTGATTACCAACATCTACGGCGTCATTTTGTCAAGGGATTGCTTGTTGATGATATAATGGGGTACAAAATTTTTGTTCATGAAATCCACTCGGATTATGCTGCAAGGATCGATAATTTCCGAGGCTACGACACCGTCAGCAAGGATATAATTCATCGATGGACATATCCACTAGTGCCAGATGTAATGAATTTTGGAAACACAGCTACTAAACTCGAACGGCAAGGAATGTACCGTGCTTCGGAAATATCACAATTGCAGTCTGCTGTTATTGGCCCTTTCACTGTCATAGGATCTGACACCAAAATTGGGAATAACACTAAAATTTCAAATTCTGTTATTGGTGAAGGATGTAAAATTGGGTCAAATGTTATCATAGAGGGATGCTATATATGGGATAACATCATCATAGAAGATGGCTGTAAACTCCAGCATGCAATTATATGTGATGGGGTGACTATAAAGTCGGGGGCTGTTCTGGAAcctggtgttattttgtcttttaagGTTGTAGTTGGGCCAGAATTTGTTGTTCCTCCCTATTCAAAGGTATCTCTATTTCAGCAGCCAATTGAGGAAGATAGCGACGAGGAGCTTGAATATGCTGATAGTACTAGTGGtattgtttattctcctgctCTAGGTATGGGTGGGGCTGGACATGTGTGGTCAACATGTGAAGGCAGCCATGAAGAAGAGTGGAGGCATTCGGTGGCGCCTATTCCTAAAGATAAAATTCTGGAGGCAATTAAAACTATGGAAGATGATCTGGAGTTAACTCATGATGATAGTTTTCTCCCACCTTCTGGAGAGCTGAAACCTAATTCTAATTATTCAGATGATGATGATCATGAAGATTCTAGAGATGACTCTTATTACTTTGATAAAGAGGTTGAAGCAACCTTTCTCAGGGCTGTGCATGAAAACATACAAGAAAGCCATCTGATCTTAGAGATCAATTCTTTGAAGTTGTCATACAATAAGCTAGCTGCTGATTGTGCTGGAGCTGTATTTTATGCCATGATGAAGTATGCTTTAGATACCCCCCATAGTTCAGCTGATGGTTTGCTTCAAAATGTTCAGGCTGTATTTACAAAATGGAAAAAGGCTCTTACATCCTATCTGACTGACATAGATGAGCAGATTGAAGTAATACTTAAATTTGAAGAAATGTGTGGGGAATCTGCTAAGGAGTTTGCTCCATTGTTCACAAGGATTTTGCACTACTTGTATAATGAAGATGTTTTAGAAGAAGATGCTATTTTGAGTTGGGAAGCCGAGTTAAAAGATGCTGACGAGGCAGATAAAGTTTTTGTTAAGCAGGCCCAAAAATTAATTCAGTGGCTAAAAGAGGCACCTGAAGAAGACGATGATGAAGAGGAATAG 2112 0.4048 MGAQKKRVSEDPDELVRVPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLTWLESAGVEDVFVFCCSHSKQVISYLEKSEWLSQPNFTVTTVESQNSVSAGDALRVIYERNVIHGDFVLISGDTVSNMSLTQALLEHKERKKKDSNAVMTMVIKRSKPNPAIHQSRLGTDELFMAIDPNTKQLLYYEDKADQSKGKLHLDKSLLFDNPSLSLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFVHEIHSDYAARIDNFRGYDTVSKDIIHRWTYPLVPDVMNFGNTATKLERQGMYRASEISQLQSAVIGPFTVIGSDTKIGNNTKISNSVIGEGCKIGSNVIIEGCYIWDNIIIEDGCKLQHAIICDGVTIKSGAVLEPGVILSFKVVVGPEFVVPPYSKVSLFQQPIEEDSDEELEYADSTSGIVYSPALGMGGAGHVWSTCEGSHEEEWRHSVAPIPKDKILEAIKTMEDDLELTHDDSFLPPSGELKPNSNYSDDDDHEDSRDDSYYFDKEVEATFLRAVHENIQESHLILEINSLKLSYNKLAADCAGAVFYAMMKYALDTPHSSADGLLQNVQAVFTKWKKALTSYLTDIDEQIEVILKFEEMCGESAKEFAPLFTRILHYLYNEDVLEEDAILSWEAELKDADEADKVFVKQAQKLIQWLKEAPEEDDDEEE 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02276 703 Gene3D Hexapeptide repeat proteins 316 433 - -
Gma19g02276 703 CDD eIF-2B_epsilon_N 20 236 IPR035543 -
Gma19g02276 703 SUPERFAMILY Nucleotide-diphospho-sugar transferases 18 366 IPR029044 -
Gma19g02276 703 SMART 542_3 610 697 IPR003307 GO:0005515
Gma19g02276 703 Gene3D - 523 702 - -
Gma19g02276 703 MobiDBLite consensus disorder prediction 502 531 - -
Gma19g02276 703 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 8 300 IPR029044 -
Gma19g02276 703 Pfam Nucleotidyl transferase 22 162 IPR005835 GO:0009058|GO:0016779
Gma19g02276 703 CDD W2_eIF2B_epsilon 536 694 IPR044123 GO:0005085|GO:0031369
Gma19g02276 703 CDD LbH_eIF2B_epsilon 338 416 - -
Gma19g02276 703 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 7 702 - -
Gma19g02276 703 SUPERFAMILY Trimeric LpxA-like enzymes 264 426 IPR011004 -
Gma19g02276 703 SUPERFAMILY ARM repeat 536 694 IPR016024 -
Gma19g02276 703 ProSiteProfiles W2 domain profile. 530 701 IPR003307 GO:0005515
Gma19g02276 703 Pfam eIF4-gamma/eIF5/eIF2-epsilon 622 701 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02276 Gma-Chr19 51404152 51415312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02276 1 694 Eukaryotic Initiation Factors Gene Family AT2G34970 64.246 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02276 K03240 - gmx:100788809 1387.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02276 19 51404152 51415312 Gma03g02238 03 47661930 47671388 GST