Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02275 ATGGGTGGTGAATTAAGTTACGTGCTTTTAAAAACGCAAATGCTAACTTCAGATCATGCCTCCGTTGTGTCCATGAACATTTTTGTGGCCCTGCTTTGTGCTTGCATTGTCATTGGCCATCTACTTGAGGAGAATCGGTGGGTGAATGAGTCTATCACTGCCCTTTTGATAGGTATTTGCACTGGGATAGTCATTTTGTTGTTGAGTCGCGGTAAAAGCTCGCATCTTCTAGTTTTCAGCGAAGATCTTTTCTTTATATACCTTCTGCCACCTATCATATTTAATGCCGGGTTTCAGGTGAAAAAGAAACAGTTTTTTGTTAACTTCATTACCATTACCCTGTTTGGAGTTGTTGGTACATTAATAAGTTGTAGCATCATAACTTTCGGTGTCACGCAAATTTTTAAGAGAATGGGTTTTGGTAAATCACTGGATATGGGGGATTATCTAGCAATTGGTGCAATATTTGCTGCTACAGATTCTGTCTGCACATTGCAGGTGCTAAACCAGGATGAGACACCTTTACTGTACAGTCTTGTATTTGGCGAGGGTGTTGTGAATGATGCTACATCTGTTGTGCTTTTTAATGCAATAAAAAGTTTTGACCTCAACAAAATTGACCCCAGAATTGGTTTGCATTTTATTGGCAACTTCTTGTATTTGTTCACCGCAAGCACCCTGCTTGGGGTCTTGGCTGGTCTACTTAGCGCTTACATTATTAAAACGCTGTATATTGGCAGGCACTCTACAGATCGTGAGGTTGCTCTTATGATGCTAATGGCATACCTTTCCTACATTCTGGCTGAATTATGGTATCTGAGTGGCATTCTTACTGTATTCTTCTGTGGGATTGTTATGTCTCATTATACTTGGCATAATGTGACTGAGAGCTCGAGAATAACTACCAAACATGCTTTTGCAACTCTCTCATTTGTTCTTGAAACCTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAGTGGAGGTTTGTTAGTGATAGGCCTAAAACATCTGTCGCTGTGAGTTCAGTATTATTGGGTCTAGTACTTGCTGGAAGAGCAGCCTTTGTTTTTCCCCTATCCTTCTTATCCAACCTCACTAAAAAGACGCAAAGTGAAAAAATAAGTTTCAGGGAGCAGGTGATAATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCCTACAATCAGTTCACCTTGTCGGGTCACACTGAACAGCGAACCAATGCCATCATGATCACCAGCACCATTACTGTTGTGCTTGTCAGCACAATGGTGTTTGGTTTGATGACTAAGCCACTCATAAGGTTTTTGCTGCCTGTTAATCCCCTTCCTAAACGCAAAAACAGTATGGCAAATATAGATTCATCTAATAATTCCCCCAAATCAATCACTGTGCCCTTTCTTGGAGGCTCCCAAGATTCTGAAAACGAATTTGATGGCAGTGAAATTCATCGTCCAAGCAGTATTCGTGCCTTACTAACAACTCCAACACATACCGTTCATCAACTATGGCGTAAGTTTGATAATTCATTTATGCGTCCGGTTTTTGGTGGTAGGGGATTTGTTCCTGTAGCTCCGAACTCGCCAACCGCTCGCAACATTAATCAACAGTGGCATTAA 1644 0.4118 MGGELSYVLLKTQMLTSDHASVVSMNIFVALLCACIVIGHLLEENRWVNESITALLIGICTGIVILLLSRGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITITLFGVVGTLISCSIITFGVTQIFKRMGFGKSLDMGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLNKIDPRIGLHFIGNFLYLFTASTLLGVLAGLLSAYIIKTLYIGRHSTDREVALMMLMAYLSYILAELWYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVLETFIFLYVGMDALDIEKWRFVSDRPKTSVAVSSVLLGLVLAGRAAFVFPLSFLSNLTKKTQSEKISFREQVIIWWAGLMRGAVSMALAYNQFTLSGHTEQRTNAIMITSTITVVLVSTMVFGLMTKPLIRFLLPVNPLPKRKNSMANIDSSNNSPKSITVPFLGGSQDSENEFDGSEIHRPSSIRALLTTPTHTVHQLWRKFDNSFMRPVFGGRGFVPVAPNSPTARNINQQWH 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02275 547 Gene3D - 131 197 - -
Gma19g02275 547 Pfam Sodium/hydrogen exchanger family 27 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gma19g02275 547 PRINTS Na+/H+ exchanger signature 83 94 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gma19g02275 547 PRINTS Na+/H+ exchanger signature 97 111 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gma19g02275 547 PRINTS Na+/H+ exchanger signature 112 120 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gma19g02275 547 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gma19g02275 547 PANTHER SODIUM/HYDROGEN EXCHANGER 9 546 IPR018422 GO:0006812|GO:0015299|GO:0016021
Gma19g02275 547 PANTHER SODIUM/HYDROGEN EXCHANGER 2 9 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02275 Gma-Chr19 51396320 51399868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02275 10 541 Antiporters AT3G05030 74.674 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02275 - - gmx:100787925 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02275 19 51396320 51399868 Gma19g02275 19 51396320 51399868 ECH
Gma19g02275 19 51396320 51399868 Gma03g02237 03 47656812 47660643 GST
Gma19g02275 19 51396320 51399868 Gma10g01563 10 42663084 42669634 PCT
Gma19g02275 19 51396320 51399868 Gma20g02149 20 48711832 48716593 PCT
Gma10g01563 10 42663084 42669634 Gma19g02275 19 51396320 51399868 PCT
Gma20g02149 20 48711832 48716593 Gma19g02275 19 51396320 51399868 PCT