Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02240 ATGGCTTCTATCCTCCACTACTTTTTAGCCCTCTCTCTTTCTTTCTCTTTCCTTTTCTTCTTATCCGACTCCGTCCCCATTCCCCAACACCACACTAACCCTACAAAACCTATAAACCTTCTGGTTCTACCCGTTCAAAATGATGCTTCCACAGGGCTCCATTGGGCCAACCTCCAAAAAAGGACCCCTCTAATGCAAGTACCAGTCCTGGTGGACCTCAATGGAAACCACTTGTGGGTTAACTGTGAGCAACACTACTCATCCAAAACATACCAAGCACCCTTCTGCCACTCCACCCAATGCTCCAGAGCCAACACTCACCAATGCCTCAGTTGCCCAGCGGCATCAAGGCCAGGGTGCCACAAAAACACGTGTGGCCTCATGTCCACCAACCCCATCACCCAACAAACCGGTTTGGGTGAACTAGGCCAAGATGTGCTTGCAATCCACGCCACTCAAGGCTCCACCCAACAACTTGGTCCATTGGTCACAGTCCCTCAGTTCCTCTTTTCTTGTGCACCTTCCTTCCTTCTTCAAAAGGGTCTCCCTAGAAACATTCAAGGAGTGGCTGGGTTAGGCCATGCACCAATTTCTCTTCCAAACCAACTTGCCTCCCACTTTGGCCTACAACACCAATTCACCACTTGCCTCTCTCGCTACCCTACCTCAAAGGGTGCTCTAATCTTCGGGGATGCACCAAACAACATGCAACAATTTCACAACCAAGATATTTTCCACGATTTGGCTTTCACCCCATTAACCGTCACACCACAAGGAGAATACAACGTGAGAGTCAGCTCCATAAGAATCAACCAGCACAGTGTGTTCCCACCGAACAAGATATCATCAACCATCGTAGGGTCTTCTGGAGGAACAATGATTAGCACCTCAACTCCTCACATGGTTCTCCAGCAATCTTTGTATCAGGCTTTCACTCAGGTGTTTGCTCAGCAGCTGGAAAAGCAAGCACAGGTGAAATCTGTGGCACCGTTTGGGCTATGCTTCAACTCCAACAAGATCAATGCATATCCTAGCGTGGACCTTGTGATGGACAAGCCTAATGGTCCTGTTTGGAGAATCTCTGGTGAGGACTTGATGGTGCAGGCACAACCTGGGGTCACGTGTTTGGGTGTTATGAATGGAGGAATGCAACCTAGAGCTGAAGTTACCTTAGGGACACGCCAGTTGGAAGAGAAGCTGATGGTATTCGATCTTGCAAGGTCAAGGGTCGGGTTTAGCACGTCATCACTGCACTCGCATGGAGTCAAATGTGGTGACCTCTTCAACTTTGCCAATGCATGA 1302 0.49 MASILHYFLALSLSFSFLFFLSDSVPIPQHHTNPTKPINLLVLPVQNDASTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQHYSSKTYQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGQDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLLQKGLPRNIQGVAGLGHAPISLPNQLASHFGLQHQFTTCLSRYPTSKGALIFGDAPNNMQQFHNQDIFHDLAFTPLTVTPQGEYNVRVSSIRINQHSVFPPNKISSTIVGSSGGTMISTSTPHMVLQQSLYQAFTQVFAQQLEKQAQVKSVAPFGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEVTLGTRQLEEKLMVFDLARSRVGFSTSSLHSHGVKCGDLFNFANA 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02240 433 PANTHER BASIC 7S GLOBULIN 6 430 - -
Gma19g02240 433 PANTHER ASPARTYL PROTEASE-RELATED 6 430 IPR001461 GO:0004190|GO:0006508
Gma19g02240 433 SUPERFAMILY Acid proteases 45 417 IPR021109 -
Gma19g02240 433 CDD xylanase_inhibitor_I_like 59 415 IPR033868 -
Gma19g02240 433 Gene3D Acid Proteases 232 433 IPR021109 -
Gma19g02240 433 ProSiteProfiles Peptidase family A1 domain profile. 54 413 IPR033121 -
Gma19g02240 433 Gene3D Acid Proteases 32 231 IPR021109 -
Gma19g02240 433 Pfam Xylanase inhibitor C-terminal 260 413 IPR032799 -
Gma19g02240 433 Pfam Xylanase inhibitor N-terminal 57 231 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02240 Gma-Chr19 51117433 51118734 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02240 - - gmx:547485 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02240 19 51117433 51118734 Gma03g02204 03 47406045 47407449 ECH
Gma02g01352 02 15662828 15664507 Gma19g02240 19 51117433 51118734 ECH
Gma10g00245 10 2253824 2254955 Gma19g02240 19 51117433 51118734 ECH
Gma03g01400 03 40131170 40142054 Gma19g02240 19 51117433 51118734 ECH
Gma19g02240 19 51117433 51118734 Gma19g02240 19 51117433 51118734 ECH
Gma19g02240 19 51117433 51118734 Gma03g02204 03 47406045 47407449 GST