Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02228 ATGGACGATCAAATCATTAAGATGCTTACAGAAAAGTTCAATCGATTCGGTATTAATTGCAATTTGAAGCCGTCATCAGAGTCACAGCCAAGCGTATCAACTGAAGCTTGTGATGAAACAGCAGATAATGTATTAGCACAACTGAACAATGAGACCTCTGACAATATGGATGAGAGTAGTATACCCAATGGAATCCATGAATGTTCTCCTCGTGAGGATCATACACTCCCAATATTGAAGAAAATCCTTGACTTGAGTACTAAAATTCAGAATTTGAAGAAACAACATGTAGCCCTATCTAATCAAGTGAAACTCACAACTGAGTCATTTCCAGGCCTAGATGTTTTAAAGTCTGTTCAGCTTCTTGGTGCTGAATATGAAGTGTTGAAAAGAAAGTACGTAGAGGAGTCCTCTGAGCGTAGGCGGCTTTACAATGAAGTGATTGAACTAAAGGGAAATATCAGAGTTTTCTGTAGATGCAGACCACTAAATGAAAGTGAAATTGCAAATGGATCAGCAGTATCTGTTGTCAATTTTGAGTCATCTTCTGATGAGCTCCAAGTCATTTGCTCTGATTCTTCAAAAAAGCACTTCAAATTTGATTATGTATTCAGACCTGAAGATAACCAAGAGACTGTTTTCGAACAAACAATACCTATCGTCACATCTGTGTTAGATGGGTATAATGTTTGCATTTTTGCATATGGTCAAACTGGAACTGGCAAGACCTTTACTATGGAGGGAACACCTCAGCATAGGGGAGTTAACTATAGAACCCTGGAGGAATTATTTCGAATATCTGAAGAGAGAAATGATGTAATAAAATATGAATTGTTTGTTAGCATGTTAGAGGTTTACAATGAGAAGATAAGAGATCTTTTGGTGGAAAATTCAGTTGAACCTACTAAGAAGTTGGAGATAAAGCAAGCTGTAGATGGAACCCAAGAAGTCCCAGGACTTATTGAAGCTCGTGTTTATGGAACAGTGGATGTGTGGGAAAAGCTGAAGTCTGGAAACCAAGCCCGATCTGTTGGATCCACTAGTGCTAATGAGCTTAGCAGTCGTTCTCATTGTTTGTTGCGAGTGACTGTTTTAGGGGAGAATTTAATCAATGGCCAGAAAACAAGGAGTCACCTTTGGCTAGTAGATTTAGCTGGCAGTGAACGTGTGGGGAAAACTGAAGCTGAAGGAGAAAGACTGAAGGAATCTCAATTCATAAACAAGTCTCTATCAGCACTTGGTGATGTTATTTCAGCTCTTGCATCCAAATCAGCCCACATACCTTACAGGAACTCAAAGCTCACCCATATACTCCAGAGCTCTTTAGGAGGTGATTGCAAAACATTAATGTTTGTCCAGATAAGTCCAGGTGCAGCAGACTTAACAGAGACACTTTGTTCTCTGAATTTTGCCACACGTGTACGAGGAATTGAGAGTGGCCCAGCCCGCAAGCAAACGGACCTTACTGAACTGAATAAGTACAAGCAAATGGTAGAGAAGGTCAAACATGATGAGAAGGAAACTAGAAAATTACAAGATAACTTGCAGGCAATGCAAATGAGACTTACTACAAGAGAACTCATGTGCCGAAATCTTCAAGAGAAGGCACAAACCTTTACACTTGTTCGGGATCTTGAGAACCAGGTGACAGAGGAGAGAAAAATGAGACTGAAACAAGAAAAAGCTATAACCTCAGTCGAGACAGCATCACCAACTTTGATGAGGAGCAGCAGTAAGTTTGCCGGCAGCCCTAGGCATCAAAGACGCAAACCCTTAGTGTGGACTCCTCTCAAGCTGAAGGGCTTGAAAAATAGCAGCAGAAAGTCATTGGTTATACCATCTCGGCCTTTCTACTGA 1857 0.4055 MDDQIIKMLTEKFNRFGINCNLKPSSESQPSVSTEACDETADNVLAQLNNETSDNMDESSIPNGIHECSPREDHTLPILKKILDLSTKIQNLKKQHVALSNQVKLTTESFPGLDVLKSVQLLGAEYEVLKRKYVEESSERRRLYNEVIELKGNIRVFCRCRPLNESEIANGSAVSVVNFESSSDELQVICSDSSKKHFKFDYVFRPEDNQETVFEQTIPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPQHRGVNYRTLEELFRISEERNDVIKYELFVSMLEVYNEKIRDLLVENSVEPTKKLEIKQAVDGTQEVPGLIEARVYGTVDVWEKLKSGNQARSVGSTSANELSSRSHCLLRVTVLGENLINGQKTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQISPGAADLTETLCSLNFATRVRGIESGPARKQTDLTELNKYKQMVEKVKHDEKETRKLQDNLQAMQMRLTTRELMCRNLQEKAQTFTLVRDLENQVTEERKMRLKQEKAITSVETASPTLMRSSSKFAGSPRHQRRKPLVWTPLKLKGLKNSSRKSLVIPSRPFY 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02228 618 Gene3D Kinesin motor domain 148 519 IPR036961 -
Gma19g02228 618 MobiDBLite consensus disorder prediction 568 592 - -
Gma19g02228 618 PANTHER KINESIN-LIKE PROTEIN KIN-14S 88 599 - -
Gma19g02228 618 Coils Coil 126 146 - -
Gma19g02228 618 ProSiteProfiles Kinesin motor domain profile. 153 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g02228 618 SMART kinesin_4 151 485 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g02228 618 PRINTS Kinesin heavy chain signature 347 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g02228 618 PRINTS Kinesin heavy chain signature 227 248 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g02228 618 PRINTS Kinesin heavy chain signature 427 448 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g02228 618 PRINTS Kinesin heavy chain signature 378 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g02228 618 Pfam Kinesin motor domain 159 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g02228 618 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 513 IPR027417 -
Gma19g02228 618 PANTHER KINESIN-RELATED 88 599 IPR027640 GO:0003777|GO:0007018
Gma19g02228 618 Coils Coil 542 562 - -
Gma19g02228 618 ProSitePatterns Kinesin motor domain signature. 377 388 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma19g02228 618 Coils Coil 82 102 - -
Gma19g02228 618 Coils Coil 494 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02228 Gma-Chr19 51050859 51055350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02228 119 498 Calmodulin-binding Proteins AT5G65930 42.408 7.79e-79 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02228 K10406 - gmx:100808603 1088.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02228 19 51050859 51055350 Gma19g02228 19 51050859 51055350 ECH