Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02222 ATGGGTTATGGTTACGGTCCTTTCTCTCTTCTACTAACCAGACGCCTCCATCTCTATTCTTCCCTAAACCCTAAACCCTCTTTCCCACTCTTTCACCTTCTCACCAAACCCTTCTCCACCGCCCCTCCAGACCCTAACCCTAAACCCTCTTCCCTCTCCGCCCGTCTCAGCTTCGTCTTCGACCAAATCGACGCCATCGAAAAAGAGCGCTCTCAGAAGCACGAAACGCTTCAGCGCATTCGAGCCTGGCGTGAATCCAAGAACGCTCCCCCTTCGCCCTCTCAGAACGATGCCCCACCGGAGCCGGCACTATCCGTCTCCGCAGACGACGAAAGCCCTCCGGAGCCGCCGCCGAAGAAGGCGGTGGAGTTGGTGCATCCGTGGCCGGAGTGGATCCAATTGATGGAGATGCTGGTGCACCAGAATTACTTCGACCACAAAAGGAGGGACGAGGATAAAATGGTCCACGACTTAGGGTTCAATTCGCCCGAGGTTGCCGAAGGATTCGATTTCACCAAGGATTTCAAGAGCGTTCACATGGCGTGTCTCTATTTCGGGAGAGACCGTTTTGATATATTGAGGTCCTTGTCAAGGAAGGATATTCAAGTTTTGGTTGGTTATGGATGCCCTACTGTGGACAGAAAGGTGGTTTTCTCTGCAAAACTTTTAAGGAAGCATGTTCACCTTGATGAAGGAGATGTCTGTAGTTCCTGCAGCTTGAGAAACACTTGTGAAAGGGGGTATCTGCTAACAAACAAAGAGGATGAGGCACAGACTCTTGATGTCATGAGGCTCCTGCTGACTTTTGGTTTTGATCCTGTTGATGGATCAGTCATCAATAAGTCACTTCTAAAGCAGAAGTCTGTGAAAACAGTGGTTCGTAAATTACTTCATGAGGTTGTCAAGCTGAGTTCAGTTCCCATTGATCCAAATCTTCCTCCTCCGGTGATTAAAAAACCACCACCAAAAGTGAAACAACCTCCTCCTCCTCCAAAGAGACGTGTTGGACGGGATGATGTCGAGATGAAAAAAGGGGACTGGCTATGTCCGAAGTGTGAATTCATGAATTTTGCAAAGAATACTGTTTGTTTACAGTGTGATGCCAAGCGTCCTAAAAGACAGTTGTTGCCAGGAGAATGGGAGTGCCCCGAGTGCAACTTCTTGAATTACAGGAGGAATATGGTATGCTTCCATTGTGAGTGTAAACGCCCACCTGATGAATTTCTTGAGAATAAAATGCAAGATAGAATACAGAGTTCCAAACCTAAGTTGGATAAGATGGGCAGCCGACAAGAGGTTTCCAATGCCTGGAATTTTGACTTTGATGACAATGAATCAGATGGTGCAGATGTAGCTGCTTTTGAGTATGCAGATACTCATGCTATAGATGAGAATTCAGATAATCATGCTCAACATGCAAATCATACGGGATGGGAAGATGATTTTGAAAAAAACAAAGTGCAAGGGTCCCCTGATGGAGAATATGCTAATCCTGGTCTTTATAGACCTAGAACAGGGTTTGATGATTTTGAGGATGAGGATGATATAGATAGTTATGAGCTAGAAACTGCTCAAAATAGTAGTAGAATGGAAGAATCTAAATATAATTTCTCAGAAGGTGAAAACTTTTCTGAATCTGAAGATATTGAAGCCACTGATGATAAGATGCATGCACGACACAAAACAGCTTCTGGAAGAAGTGCACAATCCCGATCAATTCGCAAGAATACATCTTTCTCTGGATCCGATGATGATGAACTTGAATTTGGTACAGATGAACAACTGTCCGTTGTCTCCAATTTCAAATCTGGGCATGTTTCTGCTGCTGACAGAAAAAGAAAAGGCAGAGGTCCTTCCAAGAAATTAAGCTTTGGTTCTGAATCTGAGGAAGAGATTGGTGCTGGTTTATACTCTGATGAGGATGATGACTTAAATGAAGAATATTCATTCAGGAAAAATAAAGGGAACAAACGTGATCTATCCAGACAAAATAAGGGGAATAGACACGATTCTGGAAGAAGGAACTTCACCAAAGACAGAAAGTCAGGATCTATTGGCGGTCGCCAAACAAATATGTTCAGTGATGATTTTGatggatcatcccagcagtcttataggaacaCTAAGCCCTCATTGATGTTTCTTGTGCTCTGTTTCATTCGAGGAAACATAATACAGAGCACATGA 2187 0.4367 MGYGYGPFSLLLTRRLHLYSSLNPKPSFPLFHLLTKPFSTAPPDPNPKPSSLSARLSFVFDQIDAIEKERSQKHETLQRIRAWRESKNAPPSPSQNDAPPEPALSVSADDESPPEPPPKKAVELVHPWPEWIQLMEMLVHQNYFDHKRRDEDKMVHDLGFNSPEVAEGFDFTKDFKSVHMACLYFGRDRFDILRSLSRKDIQVLVGYGCPTVDRKVVFSAKLLRKHVHLDEGDVCSSCSLRNTCERGYLLTNKEDEAQTLDVMRLLLTFGFDPVDGSVINKSLLKQKSVKTVVRKLLHEVVKLSSVPIDPNLPPPVIKKPPPKVKQPPPPPKRRVGRDDVEMKKGDWLCPKCEFMNFAKNTVCLQCDAKRPKRQLLPGEWECPECNFLNYRRNMVCFHCECKRPPDEFLENKMQDRIQSSKPKLDKMGSRQEVSNAWNFDFDDNESDGADVAAFEYADTHAIDENSDNHAQHANHTGWEDDFEKNKVQGSPDGEYANPGLYRPRTGFDDFEDEDDIDSYELETAQNSSRMEESKYNFSEGENFSESEDIEATDDKMHARHKTASGRSAQSRSIRKNTSFSGSDDDELEFGTDEQLSVVSNFKSGHVSAADRKRKGRGPSKKLSFGSESEEEIGAGLYSDEDDDLNEEYSFRKNKGNKRDLSRQNKGNRHDSGRRNFTKDRKSGSIGGRQTNMFSDDFDGSSQQSYRNTKPSLMFLVLCFIRGNIIQST 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02222 728 MobiDBLite consensus disorder prediction 311 338 - -
Gma19g02222 728 MobiDBLite consensus disorder prediction 682 702 - -
Gma19g02222 728 ProSiteProfiles Zinc finger RanBP2 type profile. 376 405 IPR001876 -
Gma19g02222 728 ProSitePatterns Zinc finger RanBP2-type signature. 380 399 IPR001876 -
Gma19g02222 728 Gene3D - 335 373 - -
Gma19g02222 728 Gene3D - 374 405 - -
Gma19g02222 728 MobiDBLite consensus disorder prediction 482 587 - -
Gma19g02222 728 MobiDBLite consensus disorder prediction 645 681 - -
Gma19g02222 728 MobiDBLite consensus disorder prediction 521 542 - -
Gma19g02222 728 PANTHER ZINC FINGER (RAN-BINDING) FAMILY PROTEIN 7 686 - -
Gma19g02222 728 PANTHER ZINC FINGER PROTEIN 7 686 - -
Gma19g02222 728 SUPERFAMILY Ran binding protein zinc finger-like 336 372 IPR036443 -
Gma19g02222 728 MobiDBLite consensus disorder prediction 84 121 - -
Gma19g02222 728 Pfam Zn-finger in Ran binding protein and others 343 371 IPR001876 -
Gma19g02222 728 Pfam Zn-finger in Ran binding protein and others 377 404 IPR001876 -
Gma19g02222 728 MobiDBLite consensus disorder prediction 605 702 - -
Gma19g02222 728 ProSitePatterns Zinc finger RanBP2-type signature. 347 366 IPR001876 -
Gma19g02222 728 ProSiteProfiles Zinc finger RanBP2 type profile. 343 372 IPR001876 -
Gma19g02222 728 MobiDBLite consensus disorder prediction 311 329 - -
Gma19g02222 728 MobiDBLite consensus disorder prediction 563 577 - -
Gma19g02222 728 SMART zf_4 345 369 IPR001876 -
Gma19g02222 728 SMART zf_4 378 402 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02222 Gma-Chr19 51013738 51021465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02222 8 701 EF-hand Containing Proteins AT1G55040 53.108 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02222 - - gmx:100807006 1375.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02222 19 51013738 51021465 Gma19g02222 19 51013738 51021465 ECH
Gma19g02222 19 51013738 51021465 Gma03g02180 03 47258531 47274475 GST