Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02215 ATGGGTCTTGATTCTCAGGCTCACAGCATGATATTCATCATTACCATATTGATATTCCTAACATTGCAAAATGCAGCAGGAAATGAAAATCAGATTGAGAAAATCTCAGGAATGGATGAGAATGACAACAAGCAAACTCCCATTGTGGAAAACTTCAGACTTTTGCTTGGACTCAACATGTTCAACACAAGAAGACCATGCTATAAGGTTGCTAACTCTGACTTTGAGTCCCTCTCACCTTCTCTGTCACCCAACACCGAAGCTGAGGCTCCGGTTCCGGCTCCGGAGCTGCATGTGCAACCTCATTCCTATCACCCACATAGGAACATGCCACTTCACAAGATTCTACAAAAAGATAGAGGCAGGGCAAAAAGAACAACACTAGTAGCTGTTGTAGTACCTGGTGGAGTTGCTACCTTAATTTGTGCACTTGGGTGTGTATGTGTTTGCAAGAAATTCAGAAATCAGAAAAGGAAACCCAATAGGACAATGCCACTCTTCAGTAAGAACGAAAGAACAGGAGGTACGTCTACGTACCAAAATCCATCAAGCAATGTGAGTTTAAACTCTGCCCCTGATCTGATTTATCTCACTTGTTTGAAACAAACTTGTGGAACACAAAATAGCAGCACTTCAAGCCATTGTTCACAACAACGCACAATTTATGAGAAGAAAGTGTTGCATCGAGAAGAATATGACAAGGTTAGCACTAGTAGTTCTTCCACAAAGGAAATTCTCTCTGTCCATGAGGATTTGGAATATGATGGTGGTGGCAAAGCTTCCTCTGGAGAGAAAACTGTTCTTCAAGGATGCCATAGCCTTTCATCAGACAGCGAAAGTTTTCATTCGTGTTTTGATACACATTCATCAATAAGTGAAACAGAAACACTGTCTCTCTCTCCTAGAAATTCAATCTCTTCAACAAATCAATTTCCTTGCTCCCCTCAGAATTCAACTACAAAGGTAAAACCAAACCAGTCACAATCACCATGCATTCCAAAACAGGAAGAGCAAAAGAAGCTTGAAACTTGTCAACCTAGCATTCCTCCCCCACCGTGTCCACCTCCATTTTTGAAAGGAAACATTAACAGTGCAATCAAAACTCCACCTTCTCCACTTCCTCAAGGTAAGGGTGGAAGTTCTCCACTGCCAAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCCACGCCAGATCGAACAATGGTGTGGGATAAGCTACGAACAAGCTCATTTGAGTTGGACGAGGTAATGATCGAGTCACTCTTTGGCTACAATTTACAAAACTCAATGAAGAACGACGAAACCAAGAGCAAAACCCCGTCTCCAAGCAAGCATGTACTTGAGCCAAAACGGTTTCAAAACATAGCAATTCTCTCGAAAGCTCTAAATACCACAGCTGAACAAATATGCGAAGCCCTGATACTAGGGAAAGGCTTGTCTTTGGAACAACTAGAGGCACTGGTGAAAATGGTACCCACGAAGGAAGAAGAGGCTAAGCTCTTAAGCTACAAAGCAGATATCAATGAACTAGGGTCTGCTGAAAAGTTTGTGAGAGCAATGCTTAGCGTACCATTTGCCTTTCAACGAGTGGAAGCCATGCTTTACAGAGAGACTTTCGAAGATGAAGTAGTTCACCTCAGAAACTCTTTTTCAACGCTAGAGGAAGCGTGCAAGGAACTAAGGTCAAGCAGGTTCTTCTTGAAATTGCTCGAAGCAGTGCTCAAAACAGGAAATCGCATGAACGTTGGAACAATCAGGGGAGGTGCCAGAGCCTTCAAACTCGACGCCCTTCTGAAGCTAGCTGATGTTAAAGGAACAGATGGTAAAACCACCTTGCTCCATTTCTTTGTTCAGGAGATTGTTCGCTCAGAAGGAATCAAAGCTTCAGAGAGGATCATGGGGAAAACAAGTGAAAACAGAACAGAAGAAGAGAAGGAAGAAGATTATAAGAGAATAGGACTAGAACTTGTTTCTGGTCTGAGTGCCGAGTTATGCAATGTTAAGAAGACAGCTACAATTGACTTGGATGTTCTTGCAAGTTCCATCTCAAACCTATCAAGTGGAGTGGCTAACATGGAGAACCTAGTAAAGGGTCTGTTGTGTGAGGATGAAAAGAGTGAGAGCTTTGTCATTTCTATGAAGTGGTTTTTGAATTATGCAGAGAGAAAGGTACGGGACTTGCAAGGAGATGAAGGGAGAGTCATGGCTCGTGTCAAAGAAATAACTGAGTATTTTCATGGGGATGTGAGTAAAGAAGAGTCGAATCCACTTCGAATCTTTGTGATCGTGAGGGACTTTCTGGAGATGGTAGATAACGTTTGCAATGAGCTTAAAAGGTCTACGAAATCACCTCGCACCATTCGGATAGAGTAG 2376 0.4251 MGLDSQAHSMIFIITILIFLTLQNAAGNENQIEKISGMDENDNKQTPIVENFRLLLGLNMFNTRRPCYKVANSDFESLSPSLSPNTEAEAPVPAPELHVQPHSYHPHRNMPLHKILQKDRGRAKRTTLVAVVVPGGVATLICALGCVCVCKKFRNQKRKPNRTMPLFSKNERTGGTSTYQNPSSNVSLNSAPDLIYLTCLKQTCGTQNSSTSSHCSQQRTIYEKKVLHREEYDKVSTSSSSTKEILSVHEDLEYDGGGKASSGEKTVLQGCHSLSSDSESFHSCFDTHSSISETETLSLSPRNSISSTNQFPCSPQNSTTKVKPNQSQSPCIPKQEEQKKLETCQPSIPPPPCPPPFLKGNINSAIKTPPSPLPQGKGGSSPLPKLKPLHWDKVRATPDRTMVWDKLRTSSFELDEVMIESLFGYNLQNSMKNDETKSKTPSPSKHVLEPKRFQNIAILSKALNTTAEQICEALILGKGLSLEQLEALVKMVPTKEEEAKLLSYKADINELGSAEKFVRAMLSVPFAFQRVEAMLYRETFEDEVVHLRNSFSTLEEACKELRSSRFFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFFVQEIVRSEGIKASERIMGKTSENRTEEEKEEDYKRIGLELVSGLSAELCNVKKTATIDLDVLASSISNLSSGVANMENLVKGLLCEDEKSESFVISMKWFLNYAERKVRDLQGDEGRVMARVKEITEYFHGDVSKEESNPLRIFVIVRDFLEMVDNVCNELKRSTKSPRTIRIE 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02215 791 Gene3D Formin, FH2 domain 398 788 IPR042201 -
Gma19g02215 791 SUPERFAMILY Formin homology 2 domain (FH2 domain) 349 783 - -
Gma19g02215 791 MobiDBLite consensus disorder prediction 367 387 - -
Gma19g02215 791 MobiDBLite consensus disorder prediction 161 184 - -
Gma19g02215 791 ProSiteProfiles Formin homology-2 (FH2) domain profile. 376 791 IPR015425 -
Gma19g02215 791 MobiDBLite consensus disorder prediction 295 336 - -
Gma19g02215 791 PANTHER FORMIN-RELATED 23 779 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma19g02215 791 SMART it6_source 376 786 IPR015425 -
Gma19g02215 791 Pfam Formin Homology 2 Domain 382 772 IPR015425 -
Gma19g02215 791 Coils Coil 788 791 - -
Gma19g02215 791 MobiDBLite consensus disorder prediction 295 334 - -
Gma19g02215 791 PANTHER FORMIN-LIKE PROTEIN 23 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02215 Gma-Chr19 50938669 50942554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02215 367 779 FH2 protein (formin) Gene Family AT3G05470 71.596 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02215 - - gmx:100805407 1496.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02215 19 50938669 50942554 Gma19g02215 19 50938669 50942554 ECH
Gma19g02215 19 50938669 50942554 Gma03g02174 03 47190893 47193935 GST
Gma19g02215 19 50938669 50942554 Gma10g01500 10 42113646 42118568 PCT
Gma19g02215 19 50938669 50942554 Gma20g02206 20 49158333 49161751 PCT