Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02203 ATGAGTCGAGGAGGCGCAGTAGCAGCAGCGAAGGGAAAGAAGAAGGGTGCTACATTCACCATTGACTGTGCAAAGCCAGTGGAAGATAAGATCATGGACATTGCTTCTCTCGAAAAGTTTCTTCAAGAGAGGATCAAGGTTGGTGGCAAAGCTGGTGCTCTTGGTGACAGTATCACTGTTACCCGCGAGAAGACCAAGATCATTGTCACCTCTGACAGTAACTTTTCCAAACGGTATTTGAAGTACTTGACGAAGAAGTACTTGAAGAAACACAATGTGCGAGACTGGCTCAGAGTGATTGCTTCAAACAAGGATAGAAGTGTTTACGAACTGAGGTACTTCAACATTGCCGAGAATGAGGGAGAGGAAGAAGATTAG 378 0.4524 MSRGGAVAAAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITVTREKTKIIVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02203 125 Pfam Ribosomal L22e protein family 15 123 IPR002671 GO:0003735|GO:0005840|GO:0006412
Gma19g02203 125 Gene3D - 6 125 IPR038526 -
Gma19g02203 125 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 125 - -
Gma19g02203 125 PANTHER 60S RIBOSOMAL PROTEIN L22 1 125 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02203 Gma-Chr19 50847813 50849216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02203 1 125 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 86.400 5.90e-67 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02203 K02891 - gmx:100499714 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02203 19 50847813 50849216 Gma03g02163 03 47099253 47102862 ECH
Gma19g02203 19 50847813 50849216 Gma19g02203 19 50847813 50849216 ECH
Gma19g02203 19 50847813 50849216 Gma03g02163 03 47099253 47102862 GST
Gma19g02203 19 50847813 50849216 Gma10g01492 10 42025291 42026506 PCT
Gma19g02203 19 50847813 50849216 Gma20g02212 20 49228517 49229892 PCT