Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02200 ATGATGATGACAATGGAGGGGATGATGGACAAGGGGGTGTTGGATGATGTGATAAGAAGGCTTCTGGAAGGGAAAGGAGGGAAACAGGTGCAACTCTCTGAGTCGGAGATCCGTCAACTCTGCGTCAACGCCAGACAAATCTTCCTCTCTCAGCCAATTCTTCTCGACCTCCGTGCTCCCATCCGCATCTGCGGTGATATACATGGTCAGTACCAGGACTTGCTGAGGCTTTTTGAATATGGTGGCTACCCTCCTGCGGCAAACTACTTGTTTCTGGGGGATTATGTGGATAGAGGGAAGCAAAGTTTGGAGACTATATGTTTGCTTTTGGCCTACAAAATAAGATATCCAGACAAAATTTATCTCTTGAGGGGAAACCATGAAGAAGCAAAGATAAACCGTATATATGGTTTTTATGATGAATGTAAAAGGAGGTTCAATGTTAGGCTATGGAAGATATTTACGGACTGCTTTAACTGTTTGCCAGTGGCTGCACTCATTGATGAGAAAATACTTTGTATGCATGGGGGACTCTCTCCAGAATTAGAAAATTTAGATCAGATAAGAGAGATTCAAAGGCCTACTGAAATTCCAGATAGTGGTCTCCTATGTGATCTGCTTTGGTCTGATCCTGATGCTAGCATTGAGGGCTGGGCAGAGAGTGACCGAGGAGTTTCATGTACTTTTGGAGCTGATGTAGTTGCAGAGTTTTTGGATAAAAATGACGTTGATCTTGTTTGCAGAGGGCATCAGGTTGTGGAGGATGGATATGAGTTTTTTGCTAAAAGAAGATTAGTCACGATATTTTCTGCTCCAAATTATGGTGGGGAATTTGACAATGCTGGTGCGTTGTTAAGCGTTGATGATTCTCTTGTATGTTCCTTTGAGATACTGAAACCCGCTGATAGAGCATCAGGAAGTGGTTCATCAAAAATGAATTTTAAGAAGCCACCCAAACTCGGAAAGATATAG 972 0.428 MMMTMEGMMDKGVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPILLDLRAPIRICGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIYLLRGNHEEAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELENLDQIREIQRPTEIPDSGLLCDLLWSDPDASIEGWAESDRGVSCTFGADVVAEFLDKNDVDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDDSLVCSFEILKPADRASGSGSSKMNFKKPPKLGKI 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02200 323 Pfam Serine-threonine protein phosphatase N-terminal domain 14 58 IPR031675 -
Gma19g02200 323 ProSitePatterns Serine/threonine specific protein phosphatases signature. 123 128 IPR006186 GO:0016787
Gma19g02200 323 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 317 - -
Gma19g02200 323 Gene3D - 7 308 IPR029052 -
Gma19g02200 323 PRINTS Serine/threonine phosphatase family signature 185 212 IPR006186 GO:0016787
Gma19g02200 323 PRINTS Serine/threonine phosphatase family signature 89 116 IPR006186 GO:0016787
Gma19g02200 323 PRINTS Serine/threonine phosphatase family signature 242 262 IPR006186 GO:0016787
Gma19g02200 323 PRINTS Serine/threonine phosphatase family signature 156 182 IPR006186 GO:0016787
Gma19g02200 323 PRINTS Serine/threonine phosphatase family signature 60 87 IPR006186 GO:0016787
Gma19g02200 323 PRINTS Serine/threonine phosphatase family signature 122 146 IPR006186 GO:0016787
Gma19g02200 323 PRINTS Serine/threonine phosphatase family signature 264 280 IPR006186 GO:0016787
Gma19g02200 323 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 8 1 317 - -
Gma19g02200 323 Pfam Calcineurin-like phosphoesterase 61 252 IPR004843 GO:0016787
Gma19g02200 323 SUPERFAMILY Metallo-dependent phosphatases 16 302 IPR029052 -
Gma19g02200 323 CDD MPP_PP1_PPKL 13 300 - -
Gma19g02200 323 SMART pp2a_7 32 302 IPR006186 GO:0016787
Gma19g02200 323 MobiDBLite consensus disorder prediction 303 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02200 Gma-Chr19 50811146 50813803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02200 55 248 Calmodulin-binding Proteins AT5G63870 32.314 1.48e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02200 K06269 - gmx:100813792 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02200 19 50811146 50813803 Gma03g02160 03 47065630 47068588 GST