Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02198 ATGAGGAAGGCCCGGGTCCATAACAAAAACCCTAGCATGCATAGTTTAAATTTGAGGTATAGCATTGACAGAAGTGTGGTGCTCGAAGAAGTCCCATTCATTGCACTGATAGCAGCGATGGGGATCGATCTTAAGGCTGGGGGTAAGAGCAAAAAGACCAAAAGAACAGCACCAAAGTCCAATGACATCTACCTCAAATTACTTGTCAAGCTTTATCGATTCCTTGTTCGAAGGACAGACAGCAATTTCAATGCTGTGATACTCAAGCGCTTGTTCATGAGCAAGGTTAACAAGCCTCCAATTTCTTTGTCAAGGTTAATTAAGTATACGAAGGGGAAGGAGGATAAAATTGCTGTAGTAGTGGGGACTGTAACTGATGATATCAGAGTATATGAAGTTCCAGCATTGAAAATTACAGCACTCAAGTTTACAGAGAGAGCACGTGCAAGAATAGAAAAGGCTGGCGGTGAATGCTTGACATTTGATCAGCTTGCCCTTAGGGCTCCTTTGGGACAGAATACGGTCCTTCTTAGAGGCCCCAAGAATGCTCGGGAAGCTGTGAAACACTTTGGTCCTGCTCCTGGTGTGCCACACAGCCATACCAAACCCTATGTACGAGCAAAGGGAAGAAAGTTCGAGAGGGCTAGAGGAAGGAGGAACAGCAGAGGATTTAGAGTTTAA 681 0.4464 MRKARVHNKNPSMHSLNLRYSIDRSVVLEEVPFIALIAAMGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNKPPISLSRLIKYTKGKEDKIAVVVGTVTDDIRVYEVPALKITALKFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGRRNSRGFRV 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02198 226 PANTHER 60S RIBOSOMAL PROTEIN L18 40 225 IPR000039 GO:0003735|GO:0005840|GO:0006412
Gma19g02198 226 Pfam Ribosomal protein 60S L18 and 50S L18e 41 226 IPR021131 -
Gma19g02198 226 SUPERFAMILY Ribosomal proteins L15p and L18e 59 178 IPR036227 -
Gma19g02198 226 Gene3D - 40 226 - -
Gma19g02198 226 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 40 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02198 Gma-Chr19 50802765 50804739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02198 42 226 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 77.957 2.60e-103 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02198 K02883 - gmx:100813255 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02198 19 50802765 50804739 Gma19g02198 19 50802765 50804739 ECH
Gma19g02198 19 50802765 50804739 Gma03g02158 03 47058261 47060476 GST
Gma19g02198 19 50802765 50804739 Gma10g01489 10 41997661 41999703 PCT
Gma19g02198 19 50802765 50804739 Gma20g02214 20 49253907 49256065 PCT