Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02195 ATGTCCATGCTTAGTTTCCTTTTCATTCTCATGCTTTTACCCTCATTTGAAGCCATTCCTTCAGATGAAGAAGTGTTTATTAATCCCTCAGAAGTCCAAACCCAAGACATGCAAGCCTTGATTGCACAAGCCTGCATGGACATTGAAAACCAAAACTCATGCCTCACAAACATCCACAACGAGCTCACCAAAATAGGCCCTCCAAGCCCCACTTCAGTGGTGAGTGCAGCACTCAAGCACACGCTCAACGAAGCAAGAGTGGCCATCGACAACATAACAAAGATCACAACATTCTCCGTCAGTTACCGGGAGCAACAAGCCATAGAAGATTGCAGGGAGCTCTTGGATTTCTCGGTTTCTGAGCTTGCATGGTCGATGGGGGAGATGAGGAGAATCCGTTCAGGTGATACCAATGCGCAATACGAGGGCAACCTTGAAGCATGGCTAAGTGCAGCTCTGAGTAACCAAGATACGTGCCTTGAAGGGTTTGAAGGCACAGATAGACGCCTTGAGAGTTACATCAGTGGAAGCTTGACACAAGTCACACAACTTATAAGCAATGTCTTGTCTTTGTACACTCAGTTGCATAGCTTACCCTTCAAGCCTCCGAGGAACACTACTACTCCTCTAACAAGTCATGAAACCCTTGAGTTTCCTGAATGGATGAGTGAGGGTGATCAAGAGTTGCTCAAAGCCAAGCCACACGGTGTGCGTGCGGATGCGGTTGTGGCTTTGGATGGGAGTGGTCATTATCGCTCTATCACTGATGCTGTTAATGCGGCTCCCAGTTATAGTCAAAGGAGGTAtgttatttacgtgaaaaaggggctttacaaggagaatgtggacatgaagaggaagatgaccaacatcatgcttgtgggtgatggtattggccaaacaattatcactagcaaccggaatttcatgcaaggatggaccacttttcgaactgccacacttgCTGTATCCGGAAAGGGTTTCATTGCAAAGGACATGTCATTCCGGAACACGGCAGGGCCAGTGaaccatcaagccgtggcactgcgtgtggattcagaccaatcagccttctacaggtgcagtgtggaagggcaccaagacaccctctacgcccactccctgcgacagttctaccgagaatgcgaaatctacggcaccatagacttcatctttggcaacggtgccgcagtgttgcaaaattgcaAAATATACACCAGGGTCCCACTTCCCTTACAGAAGGTTACCATCACGGCCCAGGGAAGAAAAAGCCCACACCAGAGCACTGGCTTTACCATCCAAGATAGCTATATTCTGGCCACCCAGCCCACGTATTTGGGCCGGCCCTGGAAGCAATACTCTAGAACTGTTTACATCAACACTTACATGAGTGGGCTAGTCCAGCCCAGAGGGTGGCTTGAGTGGTTTGGAAACTTCGCCTTGAACACTTTGTGGTACGGTGAGTACAGAAATTATGGGCCTGGTGCAGCACTGGCTGCTAGGGTCAGGTGGCCCGGTTATCATGTAATTAAGGATGCTTCCACCGCTAGTTACTTCACAGTTCAGCGCTTCATTAATGGGGGCACGTGGTTGCCAAGTACAGGTGTCAAGTTTACAGCAGGCTTGACCAATTAA 1635 0.3847 MSMLSFLFILMLLPSFEAIPSDEEVFINPSEVQTQDMQALIAQACMDIENQNSCLTNIHNELTKIGPPSPTSVVSAALKHTLNEARVAIDNITKITTFSVSYREQQAIEDCRELLDFSVSELAWSMGEMRRIRSGDTNAQYEGNLEAWLSAALSNQDTCLEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLHSLPFKPPRNTTTPLTSHETLEFPEWMSEGDQELLKAKPHGVRADAVVALDGSGHYRSITDAVNAAPSYSQRRYVIYVKKGLYKENVDMKRKMTNIMLVGDGIGQTIITSNRNFMQGWTTFRTATLAVSGKGFIAKDMSFRNTAGPVNHQAVALRVDSDQSAFYRCSVEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSYILATQPTYLGRPWKQYSRTVYINTYMSGLVQPRGWLEWFGNFALNTLWYGEYRNYGPGAALAARVRWPGYHVIKDASTASYFTVQRFINGGTWLPSTGVKFTAGLTN 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02195 544 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 196 IPR035513 -
Gma19g02195 544 CDD PMEI-like_3 53 197 - -
Gma19g02195 544 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 196 IPR035513 -
Gma19g02195 544 SUPERFAMILY Pectin lyase-like 237 541 IPR011050 -
Gma19g02195 544 PANTHER PECTINESTERASE 7 542 - -
Gma19g02195 544 Pfam Plant invertase/pectin methylesterase inhibitor 40 191 IPR006501 GO:0004857
Gma19g02195 544 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 22-RELATED 7 542 - -
Gma19g02195 544 ProSitePatterns Pectinesterase signature 2. 384 393 IPR033131 -
Gma19g02195 544 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 196 IPR006501 GO:0004857
Gma19g02195 544 Pfam Pectinesterase 240 527 IPR000070 GO:0030599|GO:0042545
Gma19g02195 544 Gene3D - 235 542 IPR012334 -
Gma19g02195 544 SMART PMEI_2 36 191 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02195 Gma-Chr19 50756457 50758837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02195 1 544 Carbohydrate Esterase AT3G05620 62.230 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02195 K01051 - gmx:100810565 1093.95