Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02188 ATGGGGCATTTTTCCTCAATGTTCAATGGGTTGGCACGGTCTTTTTCAATGAAGAAAGGAGGAAAAAATGGGAAATGTGGAGGGAGGGAAACTGCTGATGCAATGGCAAAGGAAGCTAAGAAGAATGACATGATGTTGTGTAGCTCAGGCATTGTTCATGTCGATGGTTCAAACAACTTTGCTTCCGTTTTCTCAAAAAGAGGCCAGAAAGGAGTGAACCAAGATTGCTGCATAGTGTGGGAGGAATTTGGATGCCAAGAGGACATGATATTTTGTGGGATATTTGATGGGCATGGACCATGGGGTCACTTTGTGGCCAAAAGAGTAAGAGAGTCAATGCCACCATCTTTGCTATGCAACTGGCAGGAGACACTAGCCCAAACTTCAATTGATCAGGCTATTGACGTAGAGGAAGAGAAAAGTAAACAATACAGATTCAACATATGGAAGCATTCTTACTTGAAGACTTGTGCTGCCATTGATCAAGAACTAGAGCAATATCGCAAGATAGACTCGTTTTACAGTGGAACAACTGCCCTATCAATTGTTAGACAGGGTGAACTCATTGTCATAGCAAATGTTGGTGACTCTCGTGCTGTGTTGGCTACAACATCAGATGATGGAAGTTTAGTTCCAGTTCAACTAACAATCGATTTCAAGCCCAATTTACCCCAGGAGGCAGAGAGAATAATTCAGTGCCAGGGGCGTGTGTTCTGCTTAGAGGACGAGCCAGGGGTGCATAGGGTGTGGTTACCGGATGAAGAGTCCCCGGGACTAGCCATGTCTAGGGCCTTTGGTGACTACTGCATCAAAGGGCATGGTCTAATTTCTGTGCCTGAGGTAACACACAGAAATATAAGTAGTAGAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTCTGGGATGTAATCTCTAATAAAGAAGCAGTGGATATTGTATCTTCAACAGCAGATAAAGCTAAGGCAGCTAAACGTTTGGTGGAGTGTGCGGTGCATGCATGGAAACGCAAGAGACAGGGCATTGCCGTGGATGACATTTCAGCTATTTGCCTTTTCTTTCACTCTTCCCTTTCAACAGAGCAAGTTAGCCAGGTTGCCACATTAAAATAG 1110 0.445 MGHFSSMFNGLARSFSMKKGGKNGKCGGRETADAMAKEAKKNDMMLCSSGIVHVDGSNNFASVFSKRGQKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPPSLLCNWQETLAQTSIDQAIDVEEEKSKQYRFNIWKHSYLKTCAAIDQELEQYRKIDSFYSGTTALSIVRQGELIVIANVGDSRAVLATTSDDGSLVPVQLTIDFKPNLPQEAERIIQCQGRVFCLEDEPGVHRVWLPDEESPGLAMSRAFGDYCIKGHGLISVPEVTHRNISSRDQFVVLATDGVWDVISNKEAVDIVSSTADKAKAAKRLVECAVHAWKRKRQGIAVDDISAICLFFHSSLSTEQVSQVATLK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02188 369 CDD PP2Cc 59 353 IPR001932 -
Gma19g02188 369 ProSiteProfiles PPM-type phosphatase domain profile. 60 353 IPR001932 -
Gma19g02188 369 SUPERFAMILY PP2C-like 56 354 IPR036457 -
Gma19g02188 369 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 362 - -
Gma19g02188 369 Gene3D - 52 356 IPR036457 -
Gma19g02188 369 PANTHER ALPHABET, ISOFORM E-RELATED 1 362 - -
Gma19g02188 369 SMART PP2C_4 51 351 IPR001932 -
Gma19g02188 369 Pfam Protein phosphatase 2C 78 331 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02188 Gma-Chr19 50698028 50699904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02188 1 354 PP2C-type Phosphatase Gene Family AT3G05640 73.876 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02188 - - gmx:100808955 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02188 19 50698028 50699904 Gma03g02153 03 46987672 46991487 GST
Gma19g02188 19 50698028 50699904 Gma10g01483 10 41942456 41944429 PCT
Gma19g02188 19 50698028 50699904 Gma20g02218 20 49317688 49321397 PCT
Gma10g01483 10 41942456 41944429 Gma19g02188 19 50698028 50699904 PCT
Gma20g02218 20 49317688 49321397 Gma19g02188 19 50698028 50699904 PCT